Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq55 89.7 4e-12 >seq55 Length=29365 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || |||||||||||| || || || ||||| || | ||||||| | Sbjct 15996 AGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTTCGT 16055 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 || || || || |||||||| ||||| || | ||||||||||| ||||| ||||| Sbjct 16056 CCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCAGGTGGAATGCCTTCC 16115 Query 563377 TTATCTTGAATTTT 563390 || || ||||| || Sbjct 16116 TTGTCCTGAATCTT 16129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029283043295050