Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq25 86.0 7e-12 >seq25 Length=77075 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || |||| || |||| || |||| || || ||||| ||||| |||||||| || || Sbjct 1290 AAAGGTGCAAGGTGTTCAGCAACACAGATGGGTCCTACACCAGGTCCTCCACCACCGTGA 1349 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGG 138280 || || |||| ||||| || | || | || ||||| ||||| ||| | | || Sbjct 1350 GGGATCGAGAAGGTCTTGTGAAGGTTCAAGTGGGTGACATCGGCACCCATAATGGCGGGG 1409 Query 138281 TTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATT 138340 || | || | ||||| || | || || ||||||||||| || |||||||| || || Sbjct 1410 TTG-GTGAGTGCGACCTGAGCCTGAAGGTTGGCACCATCGAGGTAGACCTGACCCCCGTT 1468 Query 138341 GTCATGAACGATCT 138354 ||| ||||| |||| Sbjct 1469 GTCGTGAACAATCT 1482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996626817400