Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq112 84.2 2e-11 >seq112 Length=308905 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||| | || || || ||||||||| | || ||| || Sbjct 97454 ATGCAGATCTTCGTAAAGACTCTGACCGGTAAGACCATTACCCTTGAGGTCGAGTCTTCT 97395 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || |||||| ||||| || || | || || ||| Sbjct 97394 GATACCATTGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 97335 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| || | |||| ||| ||||| ||||| ||||||| ||| | ||||||||||| Sbjct 97334 CAGCGATTGATTTTTGCTGGTAAGCAGCTCGAGGACGGACGAACCCTCTCGGACTACAAC 97275 Query 107736 ATTCAAAAGGAGTCTACGTTGCAC 107759 || || |||||||||||| | ||| Sbjct 97274 ATCCAGAAGGAGTCTACGCTTCAC 97251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875608978805