Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq21 122 1e-22 >seq21 Length=224232 Score = 122 bits (134), Expect = 1e-22 Identities = 181/254 (71%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || | ||| ||||||||| ||| || |||||||| || ||||||| ||||||||| Sbjct 32400 AAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAG 32459 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | || || ||||||| |||||| |||||||| || |||| ||||| | || Sbjct 32460 AAGGTAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCC 32519 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| ||||| || || || ||||| | ||| |||| | |||| Sbjct 32520 GAGAAGAAGATGCCCTCGACGGCGGCGAAAGCAACGAGACGCTCGGCAAAGGTGGCGCGC 32579 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCT--TTG-CGATGCACGGCATGCGC 160150 |||| | |||| | ||||| || ||||||| ||| ||| | || ||| | Sbjct 32580 CTGTCGCTGATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACG---GGGATGGTC 32636 Query 160151 TCGACGGCGTTAAA 160164 |||||||||| ||| Sbjct 32637 TCGACGGCGTCAAA 32650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795096239241920