Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 6e-13 >seq27 Length=191231 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/188 (71%), Gaps = 8/188 (4%) Strand=Plus/Minus Query 159608 AGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGG 159667 |||| | || || || ||||||||||| || || ||||| || ||||| | || |||| Sbjct 11245 AGATCATCCACGACAACGGTGGTCAGGTGTACCTGGATGGCGCCAATCTCCAGGCCCAGG 11186 Query 159668 TAGGTCTAGCAAAACCATGTGACTAT----GGTGCAGATGTATGTCATCTAAACTTACAT 159723 ||| || | || || | |||| ||||| ||||| ||| | ||||| || Sbjct 11185 TAGCGCTCACCAATCC----GGCTATCATGGGTGCGGATGTGACCCATTTGAACTTGCAC 11130 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 ||||| |||| ||||| ||||| || ||||||||||| || ||||| || | || || Sbjct 11129 AAGACCTTCTCGATTCCTCATGGTGGAGGAGGTCCTGGTGTCGGTCCCATCTGCGTCGCC 11070 Query 159784 AAACATCT 159791 | ||||| Sbjct 11069 GAGCATCT 11062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588007596003520