Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq10 118 8e-22 >seq10 Length=322828 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| | ||| | | |||| || | ||| Sbjct 156364 TGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGC 156423 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | ||||| || || || ||||||||||| || || ||||| || Sbjct 156424 TTTCCAGCAAAGATGAGTCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGAATCTTG 156483 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| |||| ||| || || ||||||| ||| |||||||| Sbjct 156484 GCCTTGACGTTGTCGATGGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCGGTC 156543 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 156544 AAGGTCTTGACAAAGATCTGCAT 156566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396249750557724