Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq27 95.1 1e-14 >seq27 Length=191231 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/188 (71%), Gaps = 8/188 (4%) Strand=Plus/Plus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 ||||| | || || | || ||||| || ||||||||||| || ||||| ||||| || Sbjct 11062 AGATGCTCGGCGACGCAGATGGGACCGACACCAGGACCTCCTCCACCATGAGGAATCGAG 11121 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACC----ATAGTCACATGGTTTTGC 138286 || ||||| || || || | ||| ||||| ||||| |||| | || || | Sbjct 11122 AAGGTCTTGTGCAAGTTCAAATGGGTCACATCCGCACCCATGATAGCC----GGATTGGT 11177 Query 138287 TAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATG 138346 || ||||||| || | ||||| || ||||| || || ||||||||||| ||||| || Sbjct 11178 GAGCGCTACCTGGGCCTGGAGATTGGCGCCATCCAGGTACACCTGACCACCGTTGTCGTG 11237 Query 138347 AACGATCT 138354 | ||||| Sbjct 11238 GATGATCT 11245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578955467268640