Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq8 147 2e-30 >seq8 Length=363778 Score = 147 bits (162), Expect = 2e-30 Identities = 216/306 (71%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| || ||||||||||| | || || || | ||||||||| |||||| || | Sbjct 333390 TGAGATCGGTCTCCGGGTTCTTGCAATCGCCGCAGAGGACAAACTTGTCGATGAAGCCGT 333331 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || || || | | | ||| |||||||| ||||||||| ||| | || ||||| | Sbjct 333330 CGAGGAGTTCACGAAGACGATCGGCGTCGTGGGCGCCGTTGACAATGTACCGGTCGTTCT 333271 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 | | ||||| | || || || || |||||||| || ||| |||| || || || ||| Sbjct 333270 TCTCATCGAACGAGGTCTGAGCACCGAGCTCGCATCCAAAGAACTTGGTGGGATAGGTGG 333211 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||| | |||| || || |||| ||||||| |||||| |||||||| |||| Sbjct 333210 GAGGACGGCTGAGCGAACGAGCAATGTCGGACATGTTGGGGATGACGGTCTTGATACCGT 333151 Query 34553 TGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCG 34612 ||||||| ||||||| |||| | | | ||||| ||| ||||||||| ||| Sbjct 333150 TGCCCTTGCCTTCGATTTTGGTCTGTAGGAGAGGCATGCGGTATCGGTAGAACTTGTCGT 333091 Query 34613 CCACAT 34618 | |||| Sbjct 333090 CGACAT 333085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412811753100476