Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 9e-11 >seq4 Length=437454 Score = 84.2 bits (92), Expect = 9e-11 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 160044 TTGAG-CCAAGTTGCAGGAGGCAAACTCATTCTTATCGCTGTATTCAATGATTTCGGTGC 160102 ||||| ||| ||||||| ||||| ||| | ||||||| || ||||| ||||||| Sbjct 49055 TTGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGGGCGCTGTACTCGATGATCTCGGTGC 48996 Query 160103 AGAGGTTGCTTCTCTCGATGATTCCGAGGTTCTTTTGGTTGCTTTTGAAGTTGGCCGCGT 160162 | | |||| | || |||| | ||||||||||| |||||||| ||| |||||| |||| Sbjct 48995 ACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGT 48936 Query 160163 C 160163 | Sbjct 48935 C 48935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951826042625696