Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq67 98.7 2e-15 >seq67 Length=99859 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| |||||||| || ||||| ||||| |||||||| || ||| ||| Sbjct 37859 CAGATCTTTGTCAAGACGCTCACTGGCAAAACCATCACATTGGAAGTCGAGTCTTCGGAC 37800 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || || || ||| || Sbjct 37799 ACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAG 37740 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || ||||||||||||||||| | ||| | ||||||||||| | Sbjct 37739 CGTCTGATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACTCTTTCCGATTACAACATT 37680 Query 206353 CAGAAAGAG 206361 ||||| ||| Sbjct 37679 CAGAAGGAG 37671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181730977187372