Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 5e-13 >seq21 Length=224232 Score = 91.5 bits (100), Expect = 5e-13 Identities = 127/177 (72%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||||| || || ||||| || | ||||| || | || || ||| Sbjct 32573 CACCTTTGCCGAGCGTCTCGTTGCTTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTC 32514 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| || |||||||||||| | || |||||||| || |||| |||||| ||||| | Sbjct 32513 CTTT-GCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCA 32455 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 |||| || ||| || ||||||||| | || |||||| ||||| | |||| || Sbjct 32454 ACGAGCTCATCTCCCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCA 32398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588215280507740