Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq332 201 1e-46 >seq332 Length=618 Score = 201 bits (222), Expect = 1e-46 Identities = 171/209 (82%), Gaps = 10/209 (5%) Strand=Plus/Minus Query 8415 CAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACG 8474 |||| || |||| ||||||||||| |||||||||||| ||||| |||| || | Sbjct 596 CAAGTGATCCTCCCACCTCAGCCTCCCGAGTAGCTGGGACTACAGATGCCTGCCATCATG 537 Query 8475 CCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTC 8534 || |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct 536 CCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGATGGTC 477 Query 8535 TCGAACTCCTGACCTCATGTGAT-------CCACCTGCCTCGGCCTCCCAAAGTGCTGGG 8587 || ||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct 476 TCCCTTTCCTGACCT--GGTGATTCACTCGCCACCTGCCTCAGCCTCCCAAAGTGCTGGG 419 Query 8588 ATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||| ||||||||||||| | |||||| Sbjct 418 ATTACAAGCATGAGCCACCGTG-CTGGCC 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521449331664800