Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq67 82.4 5e-11 >seq67 Length=86059 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 ||||||| | |||||||| || ||||| || || | || || || || || || |||| Sbjct 4788 ACGTCTCGTTGCCTTTGCCGCAGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCAT 4729 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 |||||||| ||||| ||| || ||||| || | | || ||||||||| | || Sbjct 4728 CTTCTGGCTCAAGAAGCGTGGTCTTATGCCCGGACTCACCTTCTCCAACGAGCTCATCTC 4669 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 || ||||||||||| ||| ||||| || || Sbjct 4668 ACGCGACGAAGGTCTTCACACCGACTTCGCCTG 4636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356174289443383