Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 2e-15 >seq9 Length=211508 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 25383 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCC 25442 ||| |||| ||||| || || | ||||||||| |||| || || ||||||||||| Sbjct 209716 AGTTTGGGGAAGGGGAGTGGTTCTCGTTCGAGCTGAATCTTGAGTGGCTCTACGTGATCT 209775 Query 25443 AGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACG 25502 ||||||||||||||| |||| || | | || | || || || |||| || Sbjct 209776 TTGTAGACGTGAGCGTCACCCATAGAGAGAACGAGTTCCTTAGGCTCGCAATCGGTGACT 209835 Query 25503 TAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCC 25562 | ||| |||||||| ||||| | | |||||| || ||||| ||||| || || || || Sbjct 209836 TTAGCGATCATGTAAGTGAGCAAAGCGTAGCTAGCAATGTTGAAGGGGACTCCCAA-TCC 209894 Query 25563 ATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 25600 | | | | || | || || | |||||| ||||||| Sbjct 209895 AAGATCGCAGGAACGTTGATACATCTGACATGAGAGCT 209932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340080969321753