Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq23 87.8 1e-12 >seq23 Length=140287 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 ||||||| || | ||| || || || || |||||||| ||| ||| | || Sbjct 2444 AAAACTAGGTGCAAGGTGCTCTCCTTCTGAATATTGTAATCAGACAGAGTTCGTCCATCC 2385 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || || ||||| ||||| | ||||||||||| |||||| ||||| ||||||||||| Sbjct 2384 TCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGAATACCTTCCTTGTCC 2325 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||| ||| ||| | || || || || | || || || | || || ||| Sbjct 2324 TGAATCTTGGCTTTGACATTGTCAATGGTGTCCGAGCTCTCCACCTCGAGTGTGATCGTT 2265 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || ||||| || |||||| Sbjct 2264 TTGCCAGTAAGCGTCTTGACAAAGATCTGCATA 2232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357332496577385