Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 >seq5 Length=263138 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || || | ||| |||| || || | |||||| || || || || |||||||| || ||| Sbjct 145853 AAAGGAGCGAGGTGTTCAGCGACGCAAATAGGCCCAACACCGGGTCCTCCACCGCCGTGT 145794 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGG 138280 || || |||| ||||| || || || ||||| ||||| || || || || | || Sbjct 145793 GGGATTGAGAAGGTCTTGTGCAAGTTGAGATGCGTCACATCGGCGCCCATGATCGCTGGG 145734 Query 138281 TTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATT 138340 || | || | ||||| || | || || ||||||||||| || ||||| || ||||| Sbjct 145733 TTGGTCAAGGCG-ACCTGAGCCTGGAGGTTGGCACCATCGAGGTACACCTGTCCGCCATT 145675 Query 138341 GTCATGAACGATCT 138354 ||| ||||| |||| Sbjct 145674 GTCGTGAACAATCT 145661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578899528785720