Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq59 513 2e-140 seq53 226 4e-54 seq213 224 1e-53 seq52 212 8e-50 seq23 190 3e-43 seq73 159 5e-34 seq100 156 6e-33 seq113 98.7 1e-15 seq180 95.1 2e-14 >seq59 Length=91690 Score = 513 bits (568), Expect = 2e-140 Identities = 1018/1504 (68%), Gaps = 5/1504 (0%) Strand=Plus/Plus Query 195286 CATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATG 195345 || |||| | | || || ||||||||| | || ||||| ||||| ||||| | ||| || Sbjct 59067 CACAATGACCAAGGCCATCGGTATCGATCTCGGTACTACCTACTCCTGTGTCGCTGTTTG 59126 Query 195346 GCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTA 195405 |||||| || ||||| ||| | || | || ||||| || ||||| || || || || || Sbjct 59127 GCAAAACGACCGTGTCGAGGTCATTGCCAACGACCAGGGTAACCGCACTACCCCTTCATA 59186 Query 195406 CGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTAT 195465 || ||||| || || || |||||| | || ||||| || || || ||| ||||| Sbjct 59187 TGTCGCCTTCACCGACTCGGAGCGTCTCATCGGTGATGCTGCCAAGAACCAGGTCGCTAT 59246 Query 195466 GAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA 195525 ||||||| ||| |||||||| || || |||||| | ||||| |||||||| || Sbjct 59247 GAACCCTCACAACACTGTCTTCGATGCTAAGCGTTTGATTGGCCGCAAGTTCGACGACGC 59306 Query 195526 GAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAA 195585 | || || ||| || ||| ||||| ||| || || || | | | | || Sbjct 59307 TGAGGTTCAGTCCGACATGAAGCACTGGCCTTTCGAGGTCGTCAACACCG---CCGGCAA 59363 Query 195586 GCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTC 195645 ||| ||| | || | | ||||||||||| || |||||||||| || || Sbjct 59364 GCCCCAGATCCGCATCGAGTACAAGGGTGAGAAGAAGACCTTCACTCCCGAAGAGATCTC 59423 Query 195646 GTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAA 195705 || ||||| | | |||||| ||||| || || ||| | | ||| || || || Sbjct 59424 TTCCATGGTTCTCCTCAAGATGCGTGAGACCGCTGAGGCTTACCTCGGTGGCACCGTTAA 59483 Query 195706 AGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGA 195765 || || || || ||||| || |||||||||| || || || || ||||| || ||||| Sbjct 59484 GGACGCCGTCGTCACTGTCCCCGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGA 59543 Query 195766 CGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGC 195825 || | | ||| ||||||| ||| | | | || ||||| || || || || || || Sbjct 59544 TGCCGGTATCATTTCGGGTCTCAACGTTATGCGTATCATCAACGAGCCCACTGCTGCCGC 59603 Query 195826 AATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCT 195885 || ||||| ||||| |||||||| | || | || || ||||| | ||||| ||||| Sbjct 59604 CATCGCTTACGGTCTTGACAAGAAGACTGAGGGTGAGAAGAATGTCCTCATCTTCGATCT 59663 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 || || ||||| || ||||| || || || | || || | ||||| ||||| || || Sbjct 59664 TGGAGGAGGTACCTTCGATGTTTCGCTCCTTACCATCGAGGAGGGTATCTTCGAGGTCAA 59723 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA 196005 ||| || |||||||| || || || |||||||| || ||||| ||||| || || Sbjct 59724 GGCCACCGCTGGTGACACCCACCTTGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCA 59783 Query 196006 -TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTC 196064 || ||| | |||||| || ||||| ||||| || | || || || | |||| Sbjct 59784 CTTCGTC-CAGGAGTTCAAGCGCAAGAACAAGAAGGACTTGACTTCCAACGCTCGTGCTC 59842 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | ||||| || | || || ||||| ||||| || || || ||||| || | || || | Sbjct 59843 TCCGTCGTCTCCGCACCGCCTGTGAGCGTGCTAAGCGCACCCTCTCGTCAGCTGCCCAGA 59902 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 | | | ||||| || ||| | || || || ||||||||||| || | || ||||||| Sbjct 59903 CCACCATCGAGATCGACTCGCTCTTCGAGGGTATTGACTTCTACACCTCCATCACCCGTG 59962 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | ||||| || ||| | | ||| | || | || || || || || | | Sbjct 59963 CTCGTTTCGAGGAGCTCTGCGGTGACCTCTTCTCCCACACCATCGAGCCCGTCGAGAAGG 60022 Query 196245 TACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGAT 196304 | || |||||| | ||||| || ||| | || | ||||| |||||||| || || | Sbjct 60023 TCCTCCGTGACTCCAAGATTGACAAGGGTTCCGTCCACGAAATCGTCCTTGTCGGTGGTT 60082 Query 196305 CAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAA 196364 | ||||||||||| ||| | || || | || | ||||||||| || | | Sbjct 60083 CCACCCGTATTCCCAAGGTCCAGAAGCTCCTCACCGACTTCTTCAACGGACGTGAGCTCA 60142 Query 196365 ACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTC 196424 |||| |||||||||| || || || ||||| || ||||| ||||| ||||| || |||| Sbjct 60143 ACAAGTCGATCAACCCCGACGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCCGCCATTC 60202 Query 196425 TCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 |||| |||| | | || ||| || || || || || |||||||| || | | Sbjct 60203 TCTCTGGTGACACCTCCGAGAAGACCCAGGACCTCCTCCTCCTCGATGTTGCTCCTCTTT 60262 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 || ||||| | || || ||||||||||| | || |||| | |||||||| ||| Sbjct 60263 CCATGGGTATCGAGACCGCGGGTGGTGTCTTCACCCCTCTTATCAAGAGGAACACCACTG 60322 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATA 196604 | || || |||||| || |||| || || || | || || || || ||||| | Sbjct 60323 TCCCCACCAAGAAGTCTGAAATCTTCTCTACCTACGCTGACAACCAGCCTGGTGTGTTGA 60382 Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCG 196664 |||| || | || || || || |||| | ||||| ||| | | || || | |||| Sbjct 60383 TTCAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACTTGCTCGGCAAGTTCG 60442 Query 196665 ATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATA 196724 | | | || || || |||| || | |||||||| ||||| | || ||||||| Sbjct 60443 AGCTCTCTGGTATCCCCCCTGCTCCTCGTGGTGTTCCTCAGATCGAGGTCACCTTCGATG 60502 Query 196725 TAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAA 196784 | || || || | ||||| |||||| | || | || |||| | | ||||| || || | Sbjct 60503 TCGATGCCAACGCCATTCTCAACGTCTCTGCCGCCGAGAAGGGTACCGGCAAGTCGGAGA 60562 Query 196785 AGAT 196788 |||| Sbjct 60563 AGAT 60566 >seq53 Length=94643 Score = 226 bits (250), Expect = 4e-54 Identities = 187/228 (82%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| || || || || |||||||||||||||||||| || Sbjct 56776 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 56717 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||||||| || ||||||||||| |||||||||||| Sbjct 56716 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCACCCGATCAG 56657 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||||| || || |||||||| ||||| |||||||| || |||||| | || |||||| Sbjct 56656 CAGCGACTCATCTTCGCTGGTAAGCAGCTCGAAGATGGCCGCACCCTCTCGGACTACAAC 56597 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| ||||| | || || |||||| Sbjct 56596 ATCCAGAAGGAGTCCACCCTCCACCTCGTTCTCCGCCTCCGTGGTGGT 56549 Score = 194 bits (214), Expect = 2e-44 Identities = 184/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || || | || || || || || || ||||| || |||| Sbjct 56553 GTGGTATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATTACGCTCGAAGTCGAGT 56494 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||||||| || ||||| |||||||| || | Sbjct 56493 CCTCGGACACTATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCTG 56434 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || ||||| ||||| || || |||||||||||||| |||||||| | || | Sbjct 56433 ACCAGCAGCGTCTTATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGTACCCTTTCCGACT 56374 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 ||||| |||| |||||||| || | || ||||| || | ||||| || ||||| Sbjct 56373 ACAACATTCAGAAGGAGTCCACCTTGCATCTTGTCCTCCGTCTTCGTGGCGGTGC 56319 >seq213 Length=30293 Score = 224 bits (248), Expect = 1e-53 Identities = 466/688 (68%), Gaps = 13/688 (2%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 |||||||||||| | |||||||| ||||| |||||||||| | || | ||||| Sbjct 13496 ATTGGTATCGATCTTGGAACTACCTACTCGTGTGTTGGTGCTCAGGTTAACGGCCGTGTC 13555 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || ||| | || |||||||||||||||| || || |||||||| || ||||| | Sbjct 13556 GAAATCATCACCAACGACCAAGGAAACCGTATTACCCCCTCGTACGTCGCTTTTACCCCT 13615 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 || |||||||| ||||| || || || || ||| | || |||||| || || Sbjct 13616 ---GAGCGTCTCGTCGGAGACGCTGCCAAGAACCAGGCCGCCCAGAACCCCGAGAACACC 13672 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC--AAGACG 195539 |||||||||| |||||||| || |||||||||| || | || | || |||| | Sbjct 13673 ATCTTTGACGCCAAGCGTCTCATCGGTCGCAAGTG---GGGTGAGTCCGACCTCAAGAAG 13729 Query 195540 ATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATG 195599 | | | || | ||| || || | | | | ||||| ||| | | Sbjct 13730 GACGCCAAGCTTTTTCCCTTCAAGCTGGTCGAGAAGAAG--GGCAAGCCCGCCATTCAGG 13787 Query 195600 TTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGA 195659 | || |||| |||||||| || | ||||| || | || ||||||| | Sbjct 13788 TCACCGTTAACGGCGAGAAGAAGGTCTTCACCCCCGAGGAGGTCTCCGCTATGGTTCTCC 13847 Query 195660 TTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGA 195719 |||||||||||||| || || ||| | | ||| | | || | | || || || | Sbjct 13848 AGAAGATGAAGGAGACCGCCGAGGCTTACCTTGGTCACAAGGTCACCCACGCCGTCGTCA 13907 Query 195720 CTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTG 195779 | || || || ||||||| || | ||||| ||||| || |||||||||| | | |||| Sbjct 13908 CCGTTCCCGCCTACTTCAACGACGCTCAACGTCAGGCCACCAAGGACGCTGGTACCATTG 13967 Query 195780 CGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839 | || || ||| ||| | || |||| || || || || || || || |||||||||| Sbjct 13968 CTGGCCTCAACGTTCTCCGTATCGTCAACGAGCCCACTGCTGCCGCCATCGCTTATGGTC 14027 Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||||||| | | ||| | | | ||| | ||| ||||| ||||| ||||| | Sbjct 14028 TCGACAAGAAGGACGGCGAGTCTCAGA--TTATCG-TCTACGATCTTGGTGGAGGTACCT 14084 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 ||||||| || || || || || |||| | ||||| ||| ||||| ||||||| Sbjct 14085 TTGATGTTTCGCTCCTTTCGATCGACTCTGGTGTCTTCGAGGTACTTGCTACCGCTGGTG 14144 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | ||||| || |||||||| || || || Sbjct 14145 ACACTCACCTCGGTGGTGAGGACTTTGA 14172 >seq52 Length=95535 Score = 212 bits (234), Expect = 8e-50 Identities = 185/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| |||||||| || || || || |||||||||||||| ||||| || Sbjct 17849 ATGCAGATCTTTGTTAAAACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCTTCG 17790 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || |||||||| ||||| || |||||| Sbjct 17789 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCAG 17730 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || ||||| ||||| |||||||| ||||||||| | || |||||| Sbjct 17729 CAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGTCGTACCCTCTCGGACTACAAC 17670 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || ||||| || || || ||||| || || | ||||| |||||||| Sbjct 17669 ATCCAGAAGGAATCCACCCTTCACCTCGTCCTCCGCCTTCGTGGTGGTGC 17620 >seq23 Length=140287 Score = 190 bits (210), Expect = 3e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || || |||||||||||||||||||| || Sbjct 1549 ATGCAGATCTTCGTAAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTTGAGTCTTCC 1608 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| ||||||||||| || ||||| || || || ||||||||| Sbjct 1609 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCTCCCGATCAG 1668 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || |||||||| || || |||||||| |||||||| || || | || |||||| Sbjct 1669 CAGCGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGACGAACTCTTTCGGACTACAAC 1728 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||||||| || || ||| | || || | || || |||||| Sbjct 1729 ATCCAAAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTCCGTGGTGGT 1776 Score = 187 bits (206), Expect = 3e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || || |||||||| ||||| ||||| |||||||| ||| Sbjct 2228 GTGGTATGCAGATCTTTGTCAAGACGCTTACTGGCAAAACGATCACACTCGAGGTGGAGA 2287 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 || ||||| || || || |||||||||||||||| || |||||||| ||||| |||| Sbjct 2288 GCTCGGACACCATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGTATTCCTCCCG 2347 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || ||||||||||||||| | || |||||||| || || |||||| Sbjct 2348 ACCAGCAGCGTTTGATCTTTGCTGGTAAACAGTTGGAGGATGGACGAACTCTGTCTGATT 2407 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| |||| |||||| || | ||||| ||| | | || || || ||| Sbjct 2408 ACAATATTCAGAAGGAGAGCACCTTGCACCTAGTTTTGCGTCTGCGTGGCGGT 2460 Score = 183 bits (202), Expect = 4e-41 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || || || || ||||| || ||||| | || || |||| Sbjct 2000 GTGGTATGCAAATCTTTGTCAAGACGCTCACAGGAAAGACCATCACTTTGGAAGTCGAGT 2059 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || |||| |||||||| || |||||||| || ||||| |||| Sbjct 2060 CTTCGGACACGATCGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCG 2119 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||||||||| || ||||||||||| ||| | ||||| || || ||||| | |||| Sbjct 2120 ATCAGCAACGACTCATCTTTGCTGGTAAGCAGTTGGAAGACGGTCGCACCCTTTCGGATT 2179 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGT 172070 ||||| |||| ||||| || | |||||||| Sbjct 2180 ACAACATTCAGAAGGAAAGCACCTTGCACCTTGT 2213 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || ||| | || || || || || || ||||| || |||| Sbjct 1772 GTGGTATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATTACGCTCGAAGTCGAGT 1831 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| | || |||||||| || || |||||||||||||| || | Sbjct 1832 CCTCGGACACTATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 1891 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || ||||| |||||||| || ||||| ||||| || || |||||| | || | Sbjct 1892 ACCAGCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACCCTCTCGGACT 1951 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || ||||| || | || || || || | ||||| |||||| Sbjct 1952 ACAACATCCAGAAGGAAAGCACCTTGCATCTCGTCCTCCGTCTTCGTGGTGGT 2004 >seq73 Length=81581 Score = 159 bits (176), Expect = 5e-34 Identities = 346/503 (69%), Gaps = 21/503 (4%) Strand=Plus/Plus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 |||||| | || | ||||| ||| ||| ||||| ||| || |||| |||| | || Sbjct 63310 TTCAAGAACGTCGCCGGTATGGACGAAGCAAAGGAAGAGATCATGGAGTTTGTCAACTTC 63369 Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAGT--GGTGCCCGAATCCCACGTGGTGCTCTTC 198567 || ||||| ||||| |||||| | ||| |||||| ||||| |||||||| ||| Sbjct 63370 CTCAAAAAGCCCGAGAAGTACGAA--AAGCTCGGTGCCAAGATCCCTCGTGGTGCCATTC 63427 Query 198568 TCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGA 198627 || | ||| |||| ||||||||||| ||| | ||||| |||| || ||||| | Sbjct 63428 TCTCTGGTCCCCCCGGTACTGGTAAGACCTTGCTAGCCAAGGCTACTGCTGGTGAGGCTG 63487 Query 198628 GTGTCCCCTTTC-TTCAGTGCTC-CGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGG 198685 |||| || || | ||| || ||| | |||| ||| |||||||||| || |||||||| Sbjct 63488 GTGTACCTTTCCTTTCCGT-CTCTGGTTCCGAG-TTCGTCGAGATGTTTGTCGGTGTTGG 63545 Query 198686 TGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA-AATCA---ACCATGTATCA 198741 | ||| || ||||| || | |||| || ||| || || || || || |||| Sbjct 63546 TCCTAGCCGTGTCCGAGACATGTTTG-CCA---ACGCCAAGAAGCACGCTCCTTGCATCA 63601 Query 198742 TCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGG---TGGA-ACTACTACACCT 198797 |||| ||||||||||| || ||| | ||||||| ||||| ||| | ||| | Sbjct 63602 TCTTTATTGATGAGATCGATGCTATCGGTAAGAGCCGTGGCAAGGGAGGCAACT-TTGGT 63660 Query 198798 GGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGAC 198857 |||||||| ||||| || |||| | ||| || | || ||||||||||||| | Sbjct 63661 GGTAATGACGAGCGAGAATCGACGCTCAACGAGTTGCTGGTGCAGATGGATGGTTTCGGT 63720 Query 198858 AATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCA 198917 | |||| |||| ||| |||| | ||| || | ||| | || || | ||| Sbjct 63721 ACTGAGGAGCACGTCGTTGTGCTTGCAGGTACTAACCGACCGGATGTGCTTGACGCTGCC 63780 Query 198918 CTGCTTCGTCCCGGTCGATTCGA 198940 || | ||||| || |||||||| Sbjct 63781 TTGATGCGTCCTGGACGATTCGA 63803 >seq100 Length=67640 Score = 156 bits (172), Expect = 6e-33 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 || || || |||||||| ||||| ||||| || ||||| ||||| ||| |||| |||||| Sbjct 61006 GGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGGCCAAG 61065 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 || || || ||||| || || || ||||| ||||| || || || || || ||||| ||| Sbjct 61066 ATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGTAAGCAG 61125 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 || || || || || |||||| | || |||||| | || ||||||||||| || ||||| Sbjct 61126 CTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCTACCCTCCACCTC 61185 Query 172069 GTTCTAAGGCTTCGGGGTGGT 172089 || || | || || |||||| Sbjct 61186 GTCCTCCGTCTCCGTGGTGGT 61206 >seq113 Length=59678 Score = 98.7 bits (108), Expect = 1e-15 Identities = 245/364 (67%), Gaps = 6/364 (2%) Strand=Plus/Plus Query 182734 AGAAGTAGTCAATCATATTTAGGATCAAGCCCTTAATATGCGAACCATCGTTATCAGCAT 182793 |||||| ||| | | || | ||| | ||||| ||||| |||||||||| ||| || Sbjct 56803 AGAAGTGGTCGAGGAAGTTGATGATGAGACCCTTGATATGTGAACCATCGTGATCCTGAT 56862 Query 182794 CAGTCATAATCATGAGACGACCATACCG-AAGCTCGGATACATCTTTGTATTCTTTTCCT 182852 | ||||| ||||||| || || || || ||||| | || || |||| || || Sbjct 56863 CGGTCATGATCATGATACTGCCGTATCGCAAGCTACTA-ACGTCAAGATATTGCTTGCCG 56921 Query 182853 TGTTGGAGACCCAATATTTTCTTTAGGTCGTTGAACTCTTGATT-TCCAGTCAACTGGGC 182911 ||||| ||||| | |||| || | | | |||| ||| || | || | | |||| | Sbjct 56922 TGTTGAAGACCGAGAATTTCTTTGATGGCTTTGATTTCTGCGTTCTTCA-TGATCTGGTC 56980 Query 182912 CACAGATGCATCTCGGACATTCTTACACTTTCCCCGAAGTGGAAAGACGCCGTAATGATC 182971 || || || || || || | ||| || || || |||||||| ||||| | || Sbjct 56981 GTGAGTGGCCTCACGAACGTTGAGAAGCTTACCACGGAGCGGAAAGACACCGTAGTTGTC 57040 Query 182972 CCTTCCAACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCGAGTCACCCTCTGTCAC 183031 | || || || ||||| || |||||||| | ||| || |||||||| || || | Sbjct 57041 ACGACCCACTTCAACAAGGCCGGCAACAGCGAGAGCCTTGGCGGAGTCACCTTCGGTGAG 57100 Query 183032 GATGAGTGTACACTTAGAAGATTGGGCTGTC-CCAGCTTTGTTTGCGTCATCAAGCTTGG 183090 ||||||||||| | || || ||| | || || ||||| || || || ||||||| Sbjct 57101 AATGAGTGTACAGTCCTTAGCTT-TCCTGCCACCTGCATTGTTGGCATCTTCGAGCTTGG 57159 Query 183091 GAAT 183094 | || Sbjct 57160 GGAT 57163 >seq180 Length=38917 Score = 95.1 bits (104), Expect = 2e-14 Identities = 221/330 (67%), Gaps = 14/330 (4%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || | | | || || ||||||| | || ||| | ||| Sbjct 11092 AAGATGAAGGAGACCGCCTCCGGCTACCTTGGCAAGCCTGTGAAGCACGCCGTTATCACT 11151 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || |||||||||| || || || || ||||| || |||||||| | |||||| || Sbjct 11152 GTTCCCGCTTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGACGCAGGTGCTATCGCT 11211 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| || || | | ||||| ||||| || || || || |||| || ||||| Sbjct 11212 GGTCTTGACGTCCTCCGTGTCATCAACGAACCCACCGCCGCCGCCCTTGCCTACGGTCTC 11271 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGGTGGTGGTACGT 195899 | || ||||| | ||||| |||| || | || || ||||| | Sbjct 11272 G------ACCGTGACGA--CTCGTCTGTTATTGCCGTCTTCGACTTGGGAGGAGGTACTT 11323 Query 195900 TTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 | ||| |||| ||||| | || |||| ||| | ||||| || ||| | || || Sbjct 11324 TCGATATCTCGATTCTCGAGATGCAGAAG--GGTGTCTTCGAGGTCAAGTCGACCAACGG 11381 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||||| || |||||||| || ||||| Sbjct 11382 TGACACTCACCTTGGTGGTGAGGACTTCGA 11411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657750061771920