Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 6e-12 >seq23 Length=140287 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 137256 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 137315 ||||||||| || || |||||| |||| ||||| ||||| || || || |||||||| || Sbjct 1932 GTCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATGCCTTCCTT 1873 Query 137316 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCAC 137375 ||| || || || | | || | ||||| | || || ||||| | || | Sbjct 1872 GTCCTGGATCTTGGCCTTAACGTTGTCGATAGTGTCCGAGGACTCGACTTCGAGCGTAAT 1813 Query 137376 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| || |||||| Sbjct 1812 GGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCATA 1776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488460575005200