Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq67 95.1 4e-14 >seq67 Length=86059 Score = 95.1 bits (104), Expect = 4e-14 Identities = 128/177 (72%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||||| ||| || || || || ||||| | || || || | || || |||| Sbjct 4800 CACCTTCGCCGAACGTCTCGTTGCCTTTGCCGCAGTTGAGGGTATCTTCTTCTCCGGCTC 4741 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 ||| ||||||||||||||| | || |||||||| ||||||| ||| || ||||| | Sbjct 4740 CTTC-GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTTATGCCCGGACTCACCTTCTCCA 4682 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 |||| || ||| || ||||| ||| | || |||||||||||| || |||| || Sbjct 4681 ACGAGCTCATCTCACGCGACGAAGGTCTTCACACCGACTTCGCCTGCCTCCTCTTCA 4625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588057991068145