Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 5e-12 >seq9 Length=211508 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29606 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCA 29665 ||| |||| ||||| || || | |||||||||||| | || || || ||||| || Sbjct 209716 AGTTTGGGGAAGGGGAGTGGTTCTCGTTCGAGCTGAATCTTGAGTGGCTCTACGTGATCT 209775 Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725 |||||||||||| || |||| | | | || | || || || ||||||| Sbjct 209776 TTGTAGACGTGAGCGTCACCCATAGAGAGAACGAGTTCCTTAGGCTCGCAATCGGTGACT 209835 Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 | ||| |||||||| ||||| | || |||||| || ||||| ||||| || || | || Sbjct 209836 TTAGCGATCATGTAAGTGAGCAAAGCGTAGCTAGCAATGTTGAAGGGGACTCCCAATCCA 209895 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCT 29822 | || | || | || || | ||| || ||||||| Sbjct 209896 AGATCGCAGGAACGTTGATACATCTGACATGAGAGCT 209932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406095576492646