Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 167 3e-36 >seq4 Length=3026064 Score = 167 bits (184), Expect = 3e-36 Identities = 416/637 (65%), Gaps = 61/637 (10%) Strand=Plus/Plus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 ||||| || || | |||| || |||||||| |||| |||| || || | Sbjct 1700168 GGCTCGACATGATCCCGGTACACATGCGCGTCGCCCATCTGCAGGATAAACTCGTGCGCG 1700227 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 ||| |||||| | || | ||||| || ||||| | |||||| || |||||||| Sbjct 1700228 TCGCAGCCCGTCACAAACGCAATCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAC 1700287 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT-------- 145858 ||||| || || || | ||| | |||||||||||||| |||| ||||||| Sbjct 1700288 GGCACGCCGAGGCCGAGGTCGCACGAGCGCTGGTACATGAGGCACGAGAGCTTGGGCCGG 1700347 Query 145859 -CCCCGCCCGCC------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGG 145905 ||||| || | ||| |||||||||| | | |||||| || |||||| Sbjct 1700348 GCCCCGGGCGTCTCAGGCAGCGTAACGAAGAACTGGCAGAACATGTGGCACGGGGGCAGG 1700407 Query 145906 GCCATG----------------------GCGG---GCAGGT-----------CCGCCGGG 145929 |||||| |||| ||| | |||||||| Sbjct 1700408 GCCATGAGCTTGAGGTCTGGGGGTGAGCGCGGTCCGCATGCAACACACCTACCCGCCGGG 1700467 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTG-CTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 ||||| ||| | || |||| || || | | ||||| || ||||||||| | || | Sbjct 1700468 TTCCACGCGCTCAGCACGATCCGCCGGTCGGTCGGG-TTGTTCTTGATCTTATCAATGAC 1700526 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || ||||||||| ||||||| ||| ||| || || | || ||||||| || Sbjct 1700527 CTCGGCGAGCTGGTCGACGCCCTTGCCCGCGTAGTCGTCCTCGCAGGTGCCGTACGCCGC 1700586 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGCTCCCTGTGCC 146107 || ||||| | ||||||||| || || || ||||| ||||| ||| || | |||| Sbjct 1700587 GCCAAAGTGGCGCCACTGGAAGCCATACACCGGCCCGAGGTCGCCCTCGCGGCG-GTGCG 1700645 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCC 146167 || || | ||| | ||||| || || |||||||| || ||||||| | |||||| Sbjct 1700646 AGAGGCCAACGCGGTCCAGGAACTCGCGCGACCCGTTCCCGGCCCAGATGTGCACGCCCT 1700705 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||||| |||| | ||| ||||||| | || | |||||| |||||||| |||| | Sbjct 1700706 TCGCGGCGAGCACGTTGCCGTCCGTGCAGCCGGCCACGAACCACAGCAGCTCCTCGATCA 1700765 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | || | | ||| || | ||| || ||||||||||| Sbjct 1700766 CGCCGCGCGTGAACACGCGCTTCGTCGTCAGCAGGGG 1700802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076726240400