Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 293 2e-74 seq2 141 1e-28 seq5 140 3e-28 >seq1 Length=5192464 Score = 293 bits (324), Expect = 2e-74 Identities = 469/661 (71%), Gaps = 22/661 (3%) Strand=Plus/Plus Query 116780 GACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC-GCTCAGGAGGTGCAGGTGGCCGA 116838 |||||||| ||||||||||| || |||||||| ||| |||| | |||| ||| || Sbjct 4742295 GACGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCTGCTCCG-AGGTCCAGTGCATGGA 4742353 Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898 ||| | |||||||||||| |||||| ||||||||| | ||||| || | || || Sbjct 4742354 GGCCAAGACCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTC 4742413 Query 116899 GACCCTCATCGACACGTACGTGCGCT----CTTCGGAGGAGAAGCTCCGTTTGTTGAACG 116954 | ||||||||||||||| | ||| | | | | || | || | || | | Sbjct 4742414 GCTTCTCATCGACACGTACATCCGCGACAACGCCCGCCGCGA-GTACC---TCTTCCAGG 4742469 Query 116955 CCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCG 117014 |||| || || || || ||| |||| |||||||||| ||||| || | ||||||| | | Sbjct 4742470 CCATTGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCACTGGATCACGG 4742529 Query 117015 GCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073 || || | || | |||| ||||| ||| | || ||||| |||||||||||| ||||| Sbjct 4742530 ACA-AGCGCTCGTCGTTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTC 4742588 Query 117074 TTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTG 117133 || |||||| || ||| |||| || ||||||||||| || |||||||||||||| || Sbjct 4742589 TTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTC 4742648 Query 117134 ACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193 || ||| ||||||||||||||| | ||||||||||| || |||||||||||| | Sbjct 4742649 ACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTC 4742708 Query 117194 CTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCG-CGTCAGGG---AGATCGTCAC 117249 || |||| || | | || ||| | | | || | || | ||||| ||| Sbjct 4742709 CTCTTCACCCACCT----CCGCCGCCGCCCTCACCCCGACACCATTGCCAAGATCATCAA 4742764 Query 117250 CGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGG 117309 || || ||||||||||||||| ||||||||||| || || || || || | || Sbjct 4742765 GGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATCGG 4742824 Query 117310 ACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCG 117368 | || || || | |||| || ||||| ||||| || |||||| | ||||| ||| Sbjct 4742825 CATGAA-CGCCAAGCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGCCTGCTCGTCG 4742883 Query 117369 AGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCT 117428 || | | || ||||| ||||||| || ||||||| | ||||| ||| | | |||| Sbjct 4742884 CCCTTGGCAACGACAAGCTCTACAACTCGACCAACCCCTTCGACTTCATGGAGATGATCT 4742943 Query 117429 C 117429 | Sbjct 4742944 C 4742944 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || ||||| |||| || || | | Sbjct 4724022 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACTCTCGAGGTTGAGTCTTCG 4723963 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||| ||| | ||||| Sbjct 4723962 GACACGATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 4723904 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 4723903 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 4723844 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| || || || Sbjct 4723843 CATCCAGAAGGAGTCGACGCTCCACCTTGT 4723814 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 4723566 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTCGAGTCGTCC 4723507 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| |||||||||||| | ||||| Sbjct 4723506 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 4723448 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| |||||||| || | || || || ||||||||| Sbjct 4723447 GCAGCGCCTTATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACGCTGTCCGACTACAA 4723388 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| || || || Sbjct 4723387 CATCCAGAAGGAGTCGACGCTCCACCTGGT 4723358 Score = 131 bits (144), Expect = 2e-25 Identities = 138/179 (77%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||||||| |||| ||||| || | Sbjct 3468192 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 3468133 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 3468132 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 3468074 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| ||||||| Sbjct 3468073 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 3468015 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| || || || ||| |||| ||||| | | | Sbjct 4723794 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAGGTCGAGTCGAGC 4723735 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| ||||| |||||| | ||||| Sbjct 4723734 GACACCATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCA 4723676 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| || ||||||||| Sbjct 4723675 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAA 4723616 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| | || || || || || | ||| || | || || Sbjct 4723615 CATTCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGCCTGCGTGGTGG 4723568 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| |||||||| | || ||||| || || Sbjct 4724250 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 4724191 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||||||||| | |||||| Sbjct 4724190 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 4724131 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||| ||||| |||||||| |||| || ||||| ||||||||| Sbjct 4724130 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAAC 4724071 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 4724070 ATCCAGAAGGAGTCTACTCTTCACCTGGT 4724042 Score = 107 bits (118), Expect = 2e-18 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| ||||| ||||| ||| |||| ||||| || | |||| | | | |||| |||| Sbjct 4724507 CTCACCGGCAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACCATTGACAACG-TCAA 4724449 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||||||||| | |||||||| || ||||||| ||| || Sbjct 4724448 GTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCTGG 4724389 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||| ||||| || |||| ||||||||| ||||||| Sbjct 4724388 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACA 4724351 Score = 100 bits (110), Expect = 3e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 ||||||||||||| | ||| ||||||| ||| || | ||| |||| ||| ||| || Sbjct 3966519 GCACGGCTTCCACATCCACCAGTTCGGTGACCTGACCGGCGGCTGCAACTCGACCGCCGG 3966460 Query 139438 GCACTTCAACCCCGCGCGCCGGGAC-CACGGCGCGCCCGACGCCGAGATCAGGCACGTCG 139496 |||||||||||| | | ||| |||||||||||||||||| || | | ||||||| Sbjct 3966459 CCACTTCAACCCCTT-CAACAAGACGCACGGCGCGCCCGACGCCAAGGCCCGCCACGTCG 3966401 Query 139497 GCGACCTGGGCAACCTCGAGTCGG 139520 | ||||| |||||| || || ||| Sbjct 3966400 GTGACCTCGGCAACATCAAGACGG 3966377 Score = 89.7 bits (98), Expect = 5e-13 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||| ||||||||||||| ||||||| | |||| Sbjct 4742101 ATTTGGCAGATGTACAAGAAGGCTCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACCTC 4742160 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||| ||||||||| | | |||||||||||||| | |||||| || Sbjct 4742161 GCCCCCGACCTTCACGACTGGGACAACAAGCTCAACGACAACGAGCGTTACTTCATCGAG 4742220 Query 116753 CACGTGCTGGCCTTTTTCGC 116772 ||||| || ||||| ||||| Sbjct 4742221 CACGTCCTCGCCTTCTTCGC 4742240 >seq2 Length=3535900 Score = 141 bits (156), Expect = 1e-28 Identities = 189/259 (73%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097 || ||| | ||||| ||| |||||| ||| ||||||| |||||| |||||||||||| Sbjct 2109898 CGGCTGATCGCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATC 2109957 Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157 || ||||||||||| || ||||||||||| || || || ||| |||||||| ||| | Sbjct 2109958 TTCTGGCTCAAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGC 2110017 Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGA 117217 | |||||||| |||| ||||||||| || |||||| | |||| || || || Sbjct 2110018 CGCGACGAGGGCATGCACACCGACTTTGCGTGCCTGCTGTACCAGCACCTGCAACACCG- 2110076 Query 117218 CCGAGCGC--GGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCT 117275 | | ||| | || | || | | || || ||| || || ||||||||| || | Sbjct 2110077 CTGCTCGCAGGCCGAGGTGCACGCA-ATTGTGCGCGAGGCAGTGGCCATCGAGAAGGAGT 2110135 Query 117276 TCCTCACCGAAGCGCTGCC 117294 |||| ||||| |||||||| Sbjct 2110136 TCCTGACCGATGCGCTGCC 2110154 >seq5 Length=2714734 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAA 40761 || || || ||||||||||| ||||||||| |||| ||||| || | |||| | | | Sbjct 1972460 GTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGAC 1972401 Query 40762 ACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATC 40821 | ||||| || || | ||||| |||||||||||| | |||||||| || || ||| Sbjct 1972400 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATC 1972341 Query 40822 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAG 40881 | ||| ||||| ||||| || |||| |||||||| ||||||||||||||||||||| Sbjct 1972340 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAG 1972281 Query 40882 GCCACGCTGCATCTAGT 40898 | || || || || || Sbjct 1972280 TCGACCCTCCACCTGGT 1972264 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 || |||||||||| | ||||||||||| ||| ||||| |||||||| ||||||| Sbjct 66375 GCGCGGCTTCCACATCCACGAGTTCGGAGACAACTCGAACGGCTGCACGTCCGCCGGCGG 66316 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGG 139497 |||||||||||| || | ||||||||| ||| |||| | | | |||||||| Sbjct 66315 CCACTTCAACCCCCACGGCAAGAACCACGGCGGCCCCACCGCCTCGGACCGCCACGTCGG 66256 Query 139498 CGACCTGGGCAACCTCGAG 139516 ||||| |||||| || || Sbjct 66255 TGACCTCGGCAACGTCAAG 66237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219135597600