Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq5 113 4e-20 >seq1 Length=5192464 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| ||| | |||||| ||||| ||||| Sbjct 4723591 GTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTG 4723650 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| ||||| || || ||||||||||| ||| || Sbjct 4723651 CTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTT 4723710 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||||||||||| ||| | || || || || Sbjct 4723711 GCTCTTCACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAGTCTTACCCGT 4723770 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 4723771 CAAGGTCTTGACGAAGATCTGCAT 4723794 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||||||||||| Sbjct 4723819 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 4723878 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| ||||| || |||||||||||||| || || Sbjct 4723879 CTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 4723938 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| ||| ||||||| || | ||| ||||| || Sbjct 4723939 GCTCTTGACGTTGTCGATCGTGTCCGAAGACTCAACCTCGAGAGTGATCGTCTTGCCCGT 4723998 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 4723999 GAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || ||| |||||||||||||||| ||||| || |||||||||||| Sbjct 3468038 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 3468097 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||||| | ||||||||||| ||| | Sbjct 3468098 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 3468157 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || || || |||||||| Sbjct 3468158 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| ||| || || || |||||| Sbjct 4723358 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCATCCTCC 4723417 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| || |||||||| ||||| || |||||||||||||| | Sbjct 4723418 AGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 4723477 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||||||||| | || | || ||| Sbjct 4723478 ATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACCTCAAGTGTGATGGTCTTG 4723537 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || || |||||||| Sbjct 4723538 CCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | |||||||| || || |||||||| || | || || ||||| Sbjct 4724042 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCC 4724101 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | || || |||||||| || ||||| |||||||||||||| Sbjct 4724102 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 4724161 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||||||||| | || | || ||| Sbjct 4724162 ATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 4724221 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || ||||| |||||||| Sbjct 4724222 CCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || |||||| |||||||||||||||| |||||||| |||||||||||| Sbjct 4724374 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTG 4724433 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | || | |||||||| | ||||||||||| ||| | Sbjct 4724434 TCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTAATG 4724493 Query 118704 GTTTTGCCGGTCAG 118717 || |||||||| || Sbjct 4724494 GTCTTGCCGGTGAG 4724507 >seq5 Length=2714734 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| || | ||||| |||||| Sbjct 1972264 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1972323 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| || |||||||| ||||| || |||||||||||||| Sbjct 1972324 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1972383 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| | ||||||||||| ||| | || ||| Sbjct 1972384 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 1972443 Query 118710 CCGGTCAGAGTTTTTAC 118726 || || || || || || Sbjct 1972444 CCCGTGAGGGTCTTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830347126920