Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 324 1e-83 seq1 187 2e-42 seq2 102 7e-17 seq5 86.0 6e-12 >seq6 Length=2565775 Score = 324 bits (358), Expect = 1e-83 Identities = 645/947 (68%), Gaps = 14/947 (1%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 |||| || || || ||||| || || ||||| || || | |||||| | || || Sbjct 1606632 GCGAGAGACGCGAGGTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCA 1606691 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT-CTGGTTGCTTTTTCGATTGCA 23139 || || || ||| |||| || ||||| | | ||| |||||| || || ||| Sbjct 1606692 GTGCAGAGGTTGGAGGACTTGATGGTGCCGAGGT-GCTGCTGGTTCGACTTGCGGTTGGC 1606750 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 | ||||||||||||||| |||| || |||||| ||| | ||| | ||| || Sbjct 1606751 AGCGTCCTTGTAGAGCATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATAGCGAA 1606810 Query 23200 CCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGT 23258 ||| | |||| || | | ||| || ||| ||| || ||||||||| | || Sbjct 1606811 CCAGAGCTTCTGGGCCTTGATG-GTCTTGCGACCCTTGCCCTCACGCTCGTACTTCTCGT 1606869 Query 23259 ACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATT--GCATCGGACA 23316 ||| | | || || | | || |||||| |||||||| | | ||| || || Sbjct 1606870 ACAGCTCCTCGAACTTCTCCGAGTGGACGTCGGCAAGGCCGGGGCACTCGGCA--GGGCA 1606927 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 |||||| ||||| ||| | || || || |||| || || || || ||||| || Sbjct 1606928 CATGAGGGTCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGAG 1606987 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 |||||||| || || |||||||| |||||||| |||||| |||||| ||| || | Sbjct 1606988 GGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGGTCGAG 1607047 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||||| ||||| || || ||||| ||||| ||||| | |||||| || || || | ||| Sbjct 1607048 GAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTT 1607107 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||| ||||| ||||||||||| || ||| || |||| | | ||||| || |||| Sbjct 1607108 GTTGCCACCCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGCATGGGGACGAT 1607167 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 ||||| || |||| ||| || | ||| || || || |||| |||||| | Sbjct 1607168 GCCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCTTGGCACGAATGTTGTGGAT 1607227 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 ||||| ||| || || ||| | | || || ||| ||||| || || |||||||| Sbjct 1607228 GTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTGTCGTA 1607287 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 |||||| || || ||| || || | ||||| | ||| ||||| ||||| || || | Sbjct 1607288 GATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACGACATCTGGGCGTG 1607347 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 ||| ||| | | ||| || || || ||||| || ||||| | | |||||| || Sbjct 1607348 GGGGGTACCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGCGCTCCGACATGAG 1607407 Query 23797 ATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCAT 23856 ||||| || |||| | | ||||||| || ||||| ||||||| ||| || ||||| Sbjct 1607408 GTTGTAGGTCTCGAGGACCTTCTCAATGTTGTCGCCGTGGATACCGACGGCCACACGCAT 1607467 Query 23857 CATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 | ||||| || || | || ||||| | |||||| || |||| || || ||||| Sbjct 1607468 GAGCATGTGCTGGGGGCGCTCGGCGACCTT---GCCGTTGATCTTGAGGAGGTACGAACG 1607524 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 | | || || || ||||| |||| ||| ||||||||| |||| Sbjct 1607525 CTCAAGGGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCACGGTCGT 1607571 >seq1 Length=5192464 Score = 187 bits (206), Expect = 2e-42 Identities = 462/693 (67%), Gaps = 26/693 (4%) Strand=Plus/Plus Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG-AC 57769 || || || ||||| |||||||| | ||||| | || | || || || ||| | Sbjct 4742292 TCGGACGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCTGCTCCGAGGTCCA-GTGCAT 4742350 Query 57770 GGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTA 57829 |||||| | ||| ||||| || || | || || ||| | || || || | || Sbjct 4742351 GGAGGCCAAGACCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTA 4742410 Query 57830 TTCGCTACTCATCGATACGTACGTGAAGGACAACGAC----GAGAAACGTAGACTGTTCA 57885 ||||| |||||||| |||||| | ||||||| | | || ||| || ||| Sbjct 4742411 CTCGCTTCTCATCGACACGTACATCCGCGACAACGCCCGCCGCGA---GTAC-CTCTTCC 4742466 Query 57886 ACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAA 57945 | || || || || || ||| ||| |||||||| || ||| | || | ||||| | Sbjct 4742467 AGGCCATTGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCACTGGATCA 4742526 Query 57946 A----AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001 |||||| | ||||||| ||| | || || || ||||| |||||||| || Sbjct 4742527 CGGACAAGCGCT----CGTCGTTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGC 4742582 Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061 || ||||| |||||| ||||| | || || ||| | ||||| || ||||| |||||| Sbjct 4742583 ATCTTCTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCC 4742642 Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121 || || || || ||||||| | || ||||| |||||||||||||| || || ||||| Sbjct 4742643 GGTCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCC 4742702 Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATC 58181 ||||| | | | | ||| | | || | || ||| | || ||| Sbjct 4742703 TGCCTCCTCTTCACCCACCTCCGCCGCCGCCCTCACCCCGACACCATTGCCAAGATCATC 4742762 Query 58182 ACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC 58241 | ||||| ||||| ||||| | ||||| ||||||| ||||| || || | | || Sbjct 4742763 AAGGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATC 4742822 Query 58242 GGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTC 58301 || |||||| | | |||| ||||||||||||||||||||||| | | ||||| Sbjct 4742823 GGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGCC---TGCTC 4742879 Query 58302 GAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATCT 58357 | |||| | || || |||||| ||| || || || || || ||| | | Sbjct 4742880 GTCGCCCTTGG-CAACGACAAGCTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAT 4742938 Query 58358 GATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 |||||||||| |||||||| | ||||| ||||| Sbjct 4742939 GATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 4742971 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| |||||||| |||| ||||| | || Sbjct 4724022 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACTCTCGAGGTTGAGTCTTCG 4723963 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | ||||| ||| || | | ||||||||| ||| | || |||||| Sbjct 4723962 GACACGATCGACAACGTCAA---GAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGAC 4723906 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| | || ||| || | ||| || Sbjct 4723905 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 4723846 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| || || || || ||| | || | || |||| Sbjct 4723845 AACATCCAGAAGGAGTCGACGCTCCACCTTGTTCTTCGTCTCCGCGGTGGTA 4723794 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || || || ||| |||| || || || | Sbjct 4723794 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAGGTCGAGTCGAGC 4723735 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || ||||||||| Sbjct 4723734 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAG 4723675 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| | || ||| ||| | ||| || ||| Sbjct 4723674 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAAC 4723615 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || |||||||| || || || ||| | ||| | || |||| Sbjct 4723614 ATTCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGCCTGCGTGGTGGTA 4723566 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || ||||| | || || || ||||| Sbjct 4723566 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTCGAGTCGTCC 4723507 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| || || ||||||||| ||| | || ||||||||| Sbjct 4723506 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 4723447 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| |||| || || || ||| || ||| Sbjct 4723446 CAGCGCCTTATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACGCTGTCCGACTACAAC 4723387 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || || ||||| || Sbjct 4723386 ATCCAGAAGGAGTCGACGCTCCACCTGGTCCT 4723355 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || ||||| | || || || | ||| Sbjct 4724250 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 4724191 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | || || |||||| Sbjct 4724190 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 4724131 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||| ||| || | || || ||| Sbjct 4724130 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAAC 4724071 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || |||||||| ||||| || Sbjct 4724070 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCT 4724039 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| |||| || || | || Sbjct 3468192 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 3468133 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 3468132 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 3468073 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || ||||| ||||| ||| | || ||| Sbjct 3468072 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGAC 3468037 >seq2 Length=3535900 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032 |||| ||||| || || ||||||||| || ||||| |||||| || || || || | Sbjct 2109899 GGCTGATCGCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATCT 2109958 Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092 | ||| | ||||| || ||||| ||||| || || ||||| |||||| |||| | Sbjct 2109959 TCTGGCTCAAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGCC 2110018 Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 |||||||||| | || || || ||||||||||| ||||| Sbjct 2110019 GCGACGAGGGCATGCACACCGACTTTGCGTGCCTGCTGTAC 2110059 >seq5 Length=2714734 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31205 GTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAA 31264 || ||||| || || ||||| || |||||| |||| || || | || |||| |||| Sbjct 1972460 GTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGAC 1972401 Query 31265 ACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324 | ||||| | || ||||||||| ||| | || |||||||||||||| || || Sbjct 1972400 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATC 1972341 Query 31325 TTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAA 31384 ||||| ||||| ||| | || ||| || | || || ||||| || || || Sbjct 1972340 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAG 1972281 Query 31385 TCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||| || | ||| | || |||| Sbjct 1972280 TCGACCCTCCACCTGGTCCTCCGTCTGCGTGGTGGTA 1972244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766344279200