Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4 125 6e-24 >seq4 Length=3026064 Score = 125 bits (138), Expect = 6e-24 Identities = 240/346 (69%), Gaps = 6/346 (2%) Strand=Plus/Plus Query 21163 CCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCG-TGGGGCCGCCTGTTAATTAGA 21221 |||| ||||||||||||| || ||||| ||||| ||| | ||| | | || || | Sbjct 1700460 CCGCCGGGTTCCACGCGCTCAGCACGATCCGCCGGTCGGTCGGGTTGT-TCTTGATCTTA 1700518 Query 21222 TCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTG 21281 || | || | |||||||| || |||| ||| |||||| | | ||| | | Sbjct 1700519 TCAATGACCTCGGCGAGCTGGTCGACGCCCTTGCCCGCGTAGTCGTCCTCGCAGGTGCCG 1700578 Query 21282 TACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGG 21341 ||| |||| ||||| || | ||||||||| || ||||||||||| || |||||||||||| Sbjct 1700579 TACGCCGCGCCAAAGTGGCGCCACTGGAAGCCATACACCGGCCCGAGGTCGCCCTCGCGG 1700638 Query 21342 CGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 |||| | | || || ||| | ||| || |||| ||||||| | || |||| || | Sbjct 1700639 CGGTGCGAG-AGGCCAACGCGGTCCAGGAACTCGCGCGACCCGTTCCCGGCCCAGATGTG 1700697 Query 21401 TACGCCGCGGCGCGAC-AGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACT 21459 ||||| | |||| | || || || ||| ||| |||| | |||||||||| || Sbjct 1700698 CACGCC-CTTCGCGGCGAGCACGTTGCCGTCCGTGCAGCCGGCCACGAACCACAGCAGCT 1700756 Query 21460 CCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGG 21505 |||| | ||||| | | ||||| | || || || | ||| || Sbjct 1700757 CCTCGATCACGCCGCGCGTGAACACGCGCTTCGTCGTCAGCAGGGG 1700802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775947864800