Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 105 5e-18 seq5 96.9 2e-15 >seq2 Length=3535900 Score = 105 bits (116), Expect = 5e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||||||| || |||||| || | || || || || || || ||||| |||||||| Sbjct 2109907 GCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATCTTCTGGCTC 2109966 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| ||| |||||||||||| | |||| || |||||| |||| ||||| ||||| Sbjct 2109967 AAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGCCGCGACGAG 2110026 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 || | ||| |||||||| || |||||| Sbjct 2110027 GGCATGCACACCGACTTTGCGTGCCTGCTGT 2110057 >seq5 Length=2714734 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 33577 ATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || ||||||||||| ||| |||||| |||||||| || ||| || | |||| Sbjct 1893341 ATCGGTGACAAGTTTGCGTCGCGTCACGG-TCAGAAGGGTACTATCGGAATCACGTACCG 1893399 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 |||| ||||||||||||||||||||| || | ||| ||| | ||||||||||||| Sbjct 1893400 CCAGGAGGACATGCCGTTCACGGCCGAGGGTATCACCCCTGACATTATCATCAACCCGCA 1893459 Query 33696 TGCGTTCCCCTCGCGCATGACG 33717 || | ||||| || |||||| Sbjct 1893460 CGCCATTCCCTCTCGAATGACG 1893481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233556584030