Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=5192464 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||| | || | ||| | ||| ||||| || || ||||| || ||| Sbjct 4723337 TGGCCTCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 4723396 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || || | || || ||||| || || ||| |||| || || ||||| ||||| Sbjct 4723397 GACAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGG 4723456 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTC 139713 || ||||| || ||||| ||| | || | || | | || || |||||| | ||| Sbjct 4723457 GGGATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTC 4723515 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||| || | |||||||||||||| || || ||||| || |||||| Sbjct 4723516 GACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 4723567 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||||| |||||||| || || ||||| || || Sbjct 4724024 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAA 4724083 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| || ||||| || || || | ||||| || ||||| || ||||| Sbjct 4724084 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 4724143 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | ||||||| || ||| ||| Sbjct 4724144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACC 4724203 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||||||||| | || || || || || |||||| Sbjct 4724204 TCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCATA 4724251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063937992000