Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-23 seq2 96.9 5e-15 >seq1 Length=5192464 Score = 125 bits (138), Expect = 1e-23 Identities = 178/248 (72%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || || |||||||| || ||||| Sbjct 4742704 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGA 4742645 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 4742644 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAG 4742585 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGC-TGTCATGT 50136 || || || || || || || |||| || | ||| | | || |||| |||| Sbjct 4742584 ATGCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGCGAACGACGAGCGCTTGTCCGTG 4742525 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| | | ||||| ||||||||||| || | || || || || || ||||| | Sbjct 4742524 ATCCAGTGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCAATGGCCTGG 4742465 Query 50197 AAGAGATA 50204 ||||| || Sbjct 4742464 AAGAGGTA 4742457 >seq2 Length=3535900 Score = 96.9 bits (106), Expect = 5e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || || || || ||| ||||| |||||||| | || || || ||||| || | Sbjct 2110057 ACAGCAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGA 2109998 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAG 50071 |||| || || ||||| ||||||||||| || ||||| || |||| || || || || | Sbjct 2109997 ACGTAAGCCCTGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGCGGCGAAAGAGCCCG 2109938 Query 50072 AAAAGAAGATTCCTTCTACTGCGGCAAAGGC 50102 | |||||||| ||||| || |||||||| Sbjct 2109937 AGAAGAAGATGCCTTCGACGCACGCAAAGGC 2109907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268710216400