Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 >seq1 Length=5192464 Score = 118 bits (130), Expect = 2e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || ||||| || ||||| | ||||| Sbjct 4723582 AAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTC 4723641 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || || || || | ||| || || || || || || || || || Sbjct 4723642 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 4723701 Query 104467 CTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525 ||||||| ||||| || || || || | ||| ||||| | || ||||| || ||||||| Sbjct 4723702 CTGAATC-TTGCTCTTCACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAG 4723760 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||| || | || || || || |||||||| Sbjct 4723761 TCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || || | || || || || || || || Sbjct 4723370 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCATCCTCCAGCTGCTTGCCG 4723429 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || || || || ||||||||||| | || Sbjct 4723430 GCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 4723489 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | || ||||| ||||| || ||||| || || | || Sbjct 4723490 ACGTTGTCAATGGTGTCGGACGACTCGACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTC 4723549 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 4723550 TTGACGAAGATCTGCAT 4723566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398252477080