Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=5192464 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| || |||||| || |||||||| || | || || || ||||||||||||| Sbjct 4724048 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGA-AAGGGTACGGCCGTCCTCCAGCTG 4724106 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || |||| | |||||||| || || | | ||||||||| || || Sbjct 4724107 CTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 4724166 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 | ||||| | | ||||| |||| ||||| ||| | || ||||| || ||||| Sbjct 4724167 CGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 4724226 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || ||||| |||||||| Sbjct 4724227 AAGAGTCTTGACAAAGATCTGCAT 4724250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251148660010