Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 2e-15 seq2 95.1 2e-15 seq4 89.7 8e-14 >seq3 Length=3082120 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| |||||||| ||||| ||||| |||||||| ||||||||| |||| Sbjct 955554 GGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCG 955613 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || | |||| || |||| || | |||| | ||||||||| Sbjct 955614 GGCCTCATCTACGAGGAGACCCGCGGTGTTCTCAAGATCTTC 955655 >seq2 Length=3535900 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| |||||||||||||| || || ||||| || ||||||||| |||| Sbjct 2802930 GGTATCACCAAGCCCGCTATCCGTCGTCTTGCCCGCCGTGGCGGTGTCAAGCGTATCTCG 2802989 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || | |||| || |||| |||| |||| | ||||||||| Sbjct 2802990 GGCCTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTC 2803031 >seq4 Length=3026064 Score = 89.7 bits (98), Expect = 8e-14 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| |||||||| ||||| || || ||||| || ||||||||| |||| Sbjct 1541078 GGTATCACCAAGCCCGCTATCCGCCGTCTCGCGCGCCGTGGCGGTGTCAAGCGTATCTCG 1541019 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || | |||| || |||| |||| |||| | ||||||||| Sbjct 1541018 GGTCTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTC 1540977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075190856930