Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 156 4e-33 seq5 118 1e-21 seq2 93.3 4e-14 >seq1 Length=5192464 Score = 156 bits (172), Expect = 4e-33 Identities = 274/393 (70%), Gaps = 11/393 (3%) Strand=Plus/Plus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCACCGCGACTTTCGCCGAG 46155 ||||| |||||||||| | | ||||||| ||| ||| | || | ||||| ||| Sbjct 4742496 AAGAAGGCCGACTGGGCCCTCCACTGGATCACGGACA--AGCGCT-CGTCGTTCGCTGAG 4742552 Query 46156 CGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATC 46215 ||| || | || || || || |||||| |||| || || ||| |||||| ||||| Sbjct 4742553 CGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCCATC 4742612 Query 46216 TTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCG 46275 || | |||| | ||| |||||||||| || || || ||||||||| || ||| Sbjct 4742613 TTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCG 4742672 Query 46276 CGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGAC 46335 || |||||||| || || || |||||||| || ||| || ||| | | | | | | Sbjct 4742673 CGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTCCTCTT---CACCCACCTCCGCCGC 4742729 Query 46336 AAGCTTGCGCCCGACACCGT-GCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGA 46394 | | ||||||||| | || || || |||||||||| || ||||| ||| |||| Sbjct 4742730 CGCCCTCACCCCGACACCATTGCCAAG-ATCATCAAGGAGGCCGTCGCCATCGAGCAGGA 4742788 Query 46395 GTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGA 46454 ||| | || | || || |||| | || | ||||||||||| || |||||| | Sbjct 4742789 GTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCA 4742848 Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 ||||| |||||||| || ||||| |||||||| Sbjct 4742849 GTACATTGAGTTTGTTGCCGACCGCCTGCTCGT 4742881 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||||||||||| ||||||||||| ||| Sbjct 4723568 CCACCACGCAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAA 4723627 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 4723628 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 4723687 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || ||| | ||||||| Sbjct 4723688 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGCTCGACTCGACC 4723747 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| || ||||| || | || || ||||| |||||||| Sbjct 4723748 TCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||| || |||||||| || Sbjct 4724024 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAA 4724083 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| | || | ||||||||||| |||||| Sbjct 4724084 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 4724143 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || |||| |||||||| Sbjct 4724144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACC 4724203 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || || || |||||||| Sbjct 4724204 TCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 4723796 CCACCGCGGAGACGAAGAACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 4723855 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 4723856 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 4723915 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||| | Sbjct 4723916 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCCGAAGACTCAACC 4723975 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || ||||| |||||||| Sbjct 4723976 TCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 4723339 GCCTCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 4723398 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| ||||||||||| || |||| | ||||||||||| || || Sbjct 4723399 CAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGG 4723458 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | || |||| ||||||| Sbjct 4723459 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGAC 4723518 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| | || || ||||| |||||||| Sbjct 4723519 CTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||||| Sbjct 3468028 GGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGAT 3468087 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 || || ||||| ||| || ||||| | || | || || | |||||||| || Sbjct 3468088 GCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTC 3468147 Query 131190 GACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||| | ||| || || || || || || ||||| |||||||| Sbjct 3468148 GAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| |||||| ||||||||||| ||| |||| | |||||||||||| |||||||| Sbjct 4724364 GGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGAT 4724423 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 || || ||||| ||| || ||||| | || | || || | |||||||| || Sbjct 4724424 GCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTC 4724483 Query 131190 GACGGTAACGGTTTTACCGGTTAG 131213 || ||||| ||| || ||||| || Sbjct 4724484 GAGGGTAATGGTCTTGCCGGTGAG 4724507 >seq5 Length=2714734 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | |||||||||||| || |||||||| || Sbjct 1972246 CCACCACGCAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1972305 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1972306 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 1972365 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 1972366 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 1972425 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 |||| ||| | ||| || || || || || || || Sbjct 1972426 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1972460 Score = 109 bits (120), Expect = 5e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 51810 GTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAG 51869 ||||||||| || || ||||| || || | || | |||| ||||||||| ||||| | Sbjct 66243 GTTGCCGAGGTCACCGACGTGGCGGTCCGAGGCGGTGGGGCCGCCGTGGTTCTTGCCGTG 66302 Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCAC 51929 ||| || ||||| |||||||||||||||| ||||| | |||| ||||||||||| | Sbjct 66303 GGGGTTGAAGTGGCCGCCGGCGGACGTGCAGCCGTTCGAGTTGTCTCCGAACTCGTGGAT 66362 Query 51930 GTGAAAGCCGTGC 51942 ||| |||||| || Sbjct 66363 GTGGAAGCCGCGC 66375 >seq2 Length=3535900 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 46165 GCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATC 46224 ||||||||| || || ||| |||| || || ||| ||| ||||||||||| | || Sbjct 2109907 GCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATCTTCTGGCTC 2109966 Query 46225 AAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 || | ||| ||||||| || || ||||| ||||||||||| ||||||||| Sbjct 2109967 AAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGCCGCGACGAG 2110026 Query 46285 GGCCTGCATACGGACTTTGCGTGTCT 46310 ||| |||| || ||||||||||| || Sbjct 2110027 GGCATGCACACCGACTTTGCGTGCCT 2110052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012740998400