Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=5192464 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || || | || | || ||||| |||||| ||||| ||||| || | Sbjct 4723566 TACCACCACGCAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGG 4723625 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || |||| || | || || ||||| || || || || || || |||| || Sbjct 4723626 AAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGG 4723685 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTC 38266 ||| || || |||||| ||| || |||||| || | || || || || ||| | Sbjct 4723686 GGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGCTCGACT--C 4723743 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | |||||||| |||||||||||||| || ||||| |||||||| Sbjct 4723744 GACCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947159178310