Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=5192464 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 126178 TTGGTGTAAATGTAGCGGGGAGCTG-CCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAA 126236 |||||| ||||||| || || |||| ||| ||| || || || | || || ||||| || Sbjct 3159907 TTGGTGAAAATGTAACGAGG-GCTGGCCGCATCTTTTCCACCTTGCATGCGGGTGCCGAA 3159965 Query 126237 CTGACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTT 126296 ||| |||| |||||| | | | || |||||| |||||||| |||||||| | Sbjct 3159966 CTGGCCGTTCGGCTCAAGGATGTTGACGTTGTTGCTGCCCACAAAACTCTGCGCAAGACT 3160025 Query 126297 GACAATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTA 126356 || ||||| | || | ||||||||||| | ||| ||||| |||||||| || || Sbjct 3160026 GATGATGGTGGAGTGCAAACTTTGCTCGCCGTGGTGGTACTCGGTGTGCTCGGCAACATA 3160085 Query 126357 GCCGCTCAGCTGCGCAACCTTGAT 126380 || |||||| | |||||||| Sbjct 3160086 ACCAGACAGCTGTGAGACCTTGAT 3160109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391923576000