Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 116 5e-21 seq2 89.7 7e-13 >seq1 Length=5192464 Score = 116 bits (128), Expect = 5e-21 Identities = 176/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||||||||| | || | |||||||| || ||||| Sbjct 4742704 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGA 4742645 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||||||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 4742644 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAG 4742585 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGC-TGTCATGT 32837 || || || || || || || ||||| || | ||| | | || |||| |||| Sbjct 4742584 ATGCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGCGAACGACGAGCGCTTGTCCGTG 4742525 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| | | ||||| ||||||||||| || | || || || || || || || | Sbjct 4742524 ATCCAGTGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCAATGGCCTGG 4742465 Query 32898 AAGAGATA 32905 ||||| || Sbjct 4742464 AAGAGGTA 4742457 >seq2 Length=3535900 Score = 89.7 bits (98), Expect = 7e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || || || || ||| ||| | |||||||| | || || | ||||| || | Sbjct 2110057 ACAGCAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGA 2109998 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 32772 |||| || || ||||| ||||||||||| || ||||| || |||| || || || || | Sbjct 2109997 ACGTAAGCCCTGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGCGGCGAAAGAGCCCG 2109938 Query 32773 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 32809 | ||||| || ||||| || ||||||||| || || Sbjct 2109937 AGAAGAAGATGCCTTCGACGCACGCAAAGGCGATCAG 2109901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631920796000