Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=5192464 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || |||||||| | || || |||||||| Sbjct 4723566 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTCGAGTCGTCC 4723507 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| || || || || || ||||| Sbjct 4723506 GACACCATTGACAACGTCAAGTCGAAGATTCAG-GACAAGGAGGGCATCCCCCCCGACCA 4723448 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||| ||||||||||| || | || |||| || || || ||| ||||| Sbjct 4723447 GCAGCGCCTTATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACGCTGTCCGACTACAA 4723388 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 4723387 CATCCAGAAGGAGTCGACGCTCCA 4723364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327947188150