Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=5192464 Score = 111 bits (122), Expect = 2e-19 Identities = 275/415 (66%), Gaps = 2/415 (0%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 4742705 GCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAG 4742646 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || || ||||| || || || || Sbjct 4742645 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAA 4742586 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || || || ||||| || || || | | ||| || || || | | || | Sbjct 4742585 GATGCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGCGAACGACGAGCGCTTGTCCGT 4742526 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| | | ||||| ||||| || ||||| || || || | || || || || | Sbjct 4742525 GATCCAGTGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCAATGGCCTG 4742466 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || ||||| || || | | || || ||||| || ||||| | || || || | Sbjct 4742465 GAAGAGGTACTCGCGGCGGGCGTTGTCGCGGATGTACGTGTCGATGAGAAGCGAGTAGGT 4742406 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || |||| |||||||| || ||||| |||||||| | || ||| || Sbjct 4742405 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGGTCTTGGCCTCCATGCA 4742346 Query 93451 CTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 ||| || || ||| | || | ||| ||||| || || ||||| || || || || Sbjct 4742345 CTGGACCTC-GGAGCAGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCGTCCGA 4742292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860730392400