Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 145 2e-29 seq7 118 2e-21 seq2 113 9e-20 seq6 87.8 4e-12 >seq1 Length=5192464 Score = 145 bits (160), Expect = 2e-29 Identities = 297/436 (68%), Gaps = 8/436 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| || ||||| | ||||||||||||||||||||| || Sbjct 4742971 TCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGTC 4742912 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||||| | |||||| || |||| | |||||| || |||||||| | Sbjct 4742911 GAGTTGTAGAGCTTGTCGTTGCCAAGGGCGACGAGCAGGCGGTCGGCAACAAACTCAATG 4742852 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCACAGAT 251741 ||||| | ||| || | | ||||||||| || | ||| | || | ||||| || Sbjct 4742851 TACTGGCACATGAGCTTGGCGTTCATGCCGATGA-GCGAGACGGGGAGGGCCTCGGTGAG 4742793 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTT--CACCTGTGCCAGAGAC 251799 ||| |||| ||| |||| || ||||||| | || ||| || ||| | | | Sbjct 4742792 GAACTCCTGCTCGATGGCGACGGCCTCCTTGATGAT---CTTGGCAATGGTGTCGGGGTG 4742736 Query 251800 AGCTTGTTCTC-CAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 || | | || | | | | ||||| | |||| | ||| ||||||||||| Sbjct 4742735 AGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTC 4742676 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 || ||||| ||||||||| | || || ||||| | ||||| ||| ||||||| Sbjct 4742675 ACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGGCCACGCTTCTTGAGCCA 4742616 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 |||||| | | ||| || || ||||| | | |||||||| | | |||| || Sbjct 4742615 GAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCAGCGAAAGCAATCAG 4742556 Query 251979 GCGCTCAGCAAACGAC 251994 |||||||| |||||| Sbjct 4742555 ACGCTCAGCGAACGAC 4742540 Score = 107 bits (118), Expect = 4e-18 Identities = 94/116 (81%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 280708 CTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGT 280767 |||| || |||||||| || || |||||||||||||| | ||| | || || ||| || Sbjct 1224272 CTCG-ATGCGCGGTCTCTCCGGTGGCCAGAAGGTCAAGGTCGTCCTTGGTGCCGCTACGT 1224214 Query 280768 GGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAG 280823 ||| | ||||||||| ||| ||||||||||||||||||||| || ||||||||| Sbjct 1224213 GGCGCCGCCCTCACGTCATCTGTCTCGACGAGCCTACCAACTACCTCGACCGCGAG 1224158 Score = 105 bits (116), Expect = 1e-17 Identities = 134/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| ||||| |||| |||| || |||||||| || || Sbjct 1224820 GGTCCCAACGGTTCCGGAAAGTCGACCCTCGTCAAGCTCCTTACCGGCGAGACTGAGCCC 1224761 Query 280239 AC--TGAGGGGT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | | | ||| |||| |||||||| || ||| | || | |||||| || |||||| Sbjct 1224760 AACATCGGCGGTACCGTCTGGAAGCACCCTAACCTTGTCATTGGTTACGTTGCCCAGCAC 1224701 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 ||||||||||||||||| | ||||| ||| ||||||| | | ||||| | ||||| Sbjct 1224700 GCTTTCCACCACATCGACCAGCACCTTGACTCGACTCCTCTCGAGTACATGCTCTGGCGT 1224641 Query 280356 TA 280357 || Sbjct 1224640 TA 1224639 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || || || ||||||||||||||||||||||| ||||| |||| ||||| || | Sbjct 1225303 GGCTCGCTCTCGGGTGGTTGGAAGATGAAGCTCGCCCTTGCTCGTGCCATCCTCTTCAAG 1225244 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| | || || ||||| ||||| ||||||||| | ||| || |||||| | ||| Sbjct 1225243 GCCGACATTCTCCTCCTTGACGAGCCCACCAACCACCTCGACGTCATCAACGTGACTTGG 1225184 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || | |||||| ||| || | || | || |||| ||||| |||||||| Sbjct 1225183 CTCATTGACTACCTCACCTCGCTCACCAACTGCACGTCGATCATGGTCTCGCACGACTCG 1225124 Query 279879 GGCTTCCT 279886 | |||||| Sbjct 1225123 GACTTCCT 1225116 Score = 95.1 bits (104), Expect = 2e-14 Identities = 378/588 (64%), Gaps = 14/588 (2%) Strand=Plus/Minus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGT 218561 ||||| || |||||||| || ||||||||||||| | ||||| |||| | || | Sbjct 3160256 ATCCCGATCTCTGACTTCGTCAACAAGGAGCTCATCTTGTTCTCCATGGCGG-ACAATAT 3160198 Query 218562 GGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTT 218621 ||||| |||||| || | ||||| ||||||| ||||| ||| | || | Sbjct 3160197 C---CGTTCCATTCCCTCGGTTGCTGATGGTTTCAAGCCTGGTCAGCGCAAGGTGCTGTA 3160141 Query 218622 TGCCGCATTCAAGCGGAACCTGGTTCAAGAA-ATTAAGGTCGCTCAGTTTTCTGGTTATG 218680 ||| |||||||| || || | |||| | || |||||| | ||| | |||||||||| Sbjct 3160140 CGCCTGCTTCAAGCGCAATCTT-TCCAAGGAGATCAAGGTCTCACAGCTGTCTGGTTATG 3160082 Query 218681 TATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCA 218740 | |||| | | ||||| ||||| ||||| ||| |||| |||| | | Sbjct 3160081 TTGCCGAGCACACCGAGTACCACCACGGCGAGCAAAGTTTGCACTCCACCATCATCAGTC 3160022 Query 218741 TGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTG 218800 | || ||| | ||||||||| |||||| | ||| | || || ||||| ||||| | Sbjct 3160021 TTGCGCAGAGTTTTGTGGGCAGCAACAACGTCAACATCCTTGAGCCGAACGGCCAGTTCG 3159962 Query 218801 GTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTT 218858 | | || | |||||||| ||| || | ||| | || || || || || Sbjct 3159961 GCACCCGCATGCAAGGTGGAAAAGATGCGGC--CAGCCCTCGTTACATTTTCACCAACAC 3159904 Query 218859 GTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGA 218918 |||| | |||| || || ||| | | || || || | ||||| || || | | Sbjct 3159903 TTCGCGCATGACTCGAGCAGTCTTCCACCCCGCGGACGACGCCCTCCTCAACTACTTGGT 3159844 Query 218919 GGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGT 218978 ||| |||||| | ||| || || |||| | | || | |||| | | || | Sbjct 3159843 GGAAGATGGTCATCAGATCGAACCTGAGTTCTTCTTACCCACCGTTCCAATGGTCCTGAT 3159784 Query 218979 AAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAA 219038 || ||||| | ||||| || || || | || || ||| || |||||| || Sbjct 3159783 CAACGGTGCGGACGGTATTGGCACCGGCTGGAGCACATCCATCCCCAATTACAACCCTGT 3159724 Query 219039 GGACATCATTGACAACGTCAAGCGTCTCATATCTGGCAAGGAGATGGT 219086 || | |||| ||||| ||||| ||||| ||| ||||| |||| Sbjct 3159723 CGATGTGGTTGAAAACGTGAAGCGCCTCATGAGAGGCGAGGAGCTGGT 3159676 >seq7 Length=2164185 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||| || | || ||||| ||||| || ||||||||||| ||||| | || ||||||||| Sbjct 1450464 GGTATCCTCGGCCCCAACGGTGCCGGCAAGTCTACCCTCATCAAGCTGCTCACTGGCGAG 1450405 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 ||| || ||||| |||| | ||||| || | | || | | |||||| ||| Sbjct 1450404 ACCGTCCCCCAGGAGGGCACCGTCTACAAGCACCCTGCCCTCCGTGTTGGTTACGTTGCT 1450345 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| |||||||||||| | |||||| || | |||| || ||| ||||| ||| Sbjct 1450344 CAGCACGCCTTCCACCACATCAACCTCCACCTCGAGAAGACTGCTGTCCAGTACATCCAG 1450285 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 1450284 TGGCGTTA 1450277 Score = 113 bits (124), Expect = 9e-20 Identities = 180/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || ||||| |||||||||||||||||||| | ||| | || ||||| || | ||||| Sbjct 1450929 TCGCTGTCTGGTGGTTGGAAGATGAAGCTCGAGCTCGCCCGTGCCATGCTTATCGGTGCC 1450870 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || || || |||||||| ||||||||| ||||| | || |||||||| Sbjct 1450869 GACCTTCTCCTTCTCGATGAGCCTACCAACCACTTGGACGTTCAGACTGTCGCCTGGCTC 1450810 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 | | |||||| || || | ||| | | |||||| ||||| |||||||||||| Sbjct 1450809 GAGGACTACCTCGTCAACCT---CGACGTTACCTGCCTCATCGTCTCGCACGACTCTGGC 1450753 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAG 279941 ||||| || ||| | | || || ||||| ||| | || ||||||| | | Sbjct 1450752 TTCCTTGACAACGTCACGACCGATATTATCCACTACGAGGAGAA---GAAGCTCGTCTAC 1450696 Query 279942 CACATCGGCAACCTGTC 279958 || |||||||||||| Sbjct 1450695 TACCCCGGCAACCTGTC 1450679 >seq2 Length=3535900 Score = 113 bits (124), Expect = 9e-20 Identities = 283/437 (65%), Gaps = 51/437 (12%) Strand=Plus/Minus Query 251577 CTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTT 251636 |||||||| ||| ||||| |||||||| ||||||| || |||||||| | |||| |||| Sbjct 2110349 CTTGCCCTGCAGCGAGATCAGCTCCATCCAGTCGAATGGATTTGTGGCGTGGTACAGCTT 2110290 Query 251637 GGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCAT--- 251693 | || ||||||||| || | | || || || |||||||||| |||||| | ||| Sbjct 2110289 GTCATAGCCAAGTGCCACAACCAGCCGATCGGCAACAAACTCCATATACTGGCACATGGA 2110230 Query 251694 ---------CAGT-----------------------------------TCAGAGTTCATG 251709 |||| || ||||| || Sbjct 2110229 CTAAGGCGTCAGTAACTCACATCGGCAATCAACCTAGCCCAACCTACCTCCGAGTTGATA 2110170 Query 251710 CCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCC 251769 || |||| || ||||| | || || | ||| ||||| ||| |||| |||||||| Sbjct 2110169 CCTATCAAGCGGCAAGGCAGCGCATCGGTCAGGAACTCCTTCTCGATGGCCACTGCCTCG 2110110 Query 251770 TCCACAATTGCCTTCACCTGTGCCAGAGA-CAGCTTGTTCTCCAGCTTTGAGTACAGGAG 251828 ||||||||| | ||||| ||| | || |||| || | ||| | |||||| || Sbjct 2110109 CGCACAATTGCGTGCACCTCGGCCTGCGAGCAGCG-GTGTTGCAGGTGCTGGTACAGCAG 2110051 Query 251829 -CTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCA 251887 | ||| || | || |||| ||||||||||| ||||| | |||||| || | | Sbjct 2110050 GCACGCAAAGTCGGTG-TGCATGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGAACGTAA 2109992 Query 251888 GGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACA 251947 | || ||||| | ||||| ||| ||||||||||||| ||| || || || ||||| | Sbjct 2109991 GCCCTGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGCGGCGAAAGAGCCCGAGAAGA 2109932 Query 251948 GCAGACCCTCGACACAC 251964 | || ||||| ||| Sbjct 2109931 AGATGCCTTCGACGCAC 2109915 >seq6 Length=2565775 Score = 87.8 bits (96), Expect = 4e-12 Identities = 279/429 (65%), Gaps = 13/429 (3%) Strand=Plus/Plus Query 294089 CCTTCCCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAG 294148 |||| |||||| ||| ||||| ||| ||||| ||| | | || | || || | Sbjct 1606843 CCTTGCCCTCACGCTCGTACTTCTCGTACAGCTCCTCGAACTTCTCCGAGTGGACGTCGG 1606902 Query 294149 ACAGGCCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCT 294208 ||||| ||||||||| |||| | || | ||||| | | || ||| || |||| Sbjct 1606903 CAAGGCCGGGGCACTCGGCAGGGCACATGAGGGTCCACTCGCCGTCCTGCTCGACACGCT 1606962 Query 294209 TCATGAATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCT 294268 ||||||| || || || ||| | ||||| || | || |||||||| | ||||| Sbjct 1606963 TCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCT 1607022 Query 294269 CACCTTGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGAT 294328 || || || | ||| |||||||| | | |||| || ||| || || | Sbjct 1607023 TGCCGTGGTTCTTCCTCAGGTCGAGGAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGT 1607082 Query 294329 ACACAGCAAAGG-AC-----CCCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGG 294382 | | ||||||| || | ||| || || ||||||| | |||| || |||| Sbjct 1607083 AGATGGCAAAGGCACCGGGACGCTTGTTG---CCACCCTGGTCGACGTAACGAGCAGTGG 1607139 Query 294383 TGTCAAACACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCT 294442 ||| || | ||||| || |||||||| | || | || ||||| ||| ||| | Sbjct 1607140 CGTCGTACGCGCGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTGGTGCCGGCAATGT 1607199 Query 294443 --CAGCCCCGCGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500 ||||| | | ||||||| | ||||||||||| || |||||| || |||||| Sbjct 1607200 ACGAGCCCTTGG--CACGAATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGA 1607257 Query 294501 CAACTGGGC 294509 | |||||| Sbjct 1607258 GATCTGGGC 1607266 Score = 84.2 bits (92), Expect = 4e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||||| ||| |||| ||||||||||| || ||||||||||| || || | |||| || Sbjct 1605860 CTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCGAGGTCGATGACAGCCTTCTGCGA 1605919 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234 |||||||| |||||||| | ||||||| ||| | ||||| | | ||| Sbjct 1605920 AATCTCCCAGACAGTCTTGTAGATGGCCTTGAGGTCATCAGGAATGTTGGGGATGTGCTG 1605979 Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294 ||| || || || ||| || || |||||||||| | ||| ||| | ||| | Sbjct 1605980 GATGGAACCACCCGAGGCGATGATGAGGTTCTTCATGTTGTCGTCCCAGATGCCAAGGTT 1606039 Query 293295 AATGAGCTCGCGGA 293308 ||||| ||||||| Sbjct 1606040 GATGAGGTCGCGGA 1606053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836668308410