Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-26 seq5 84.2 5e-11 >seq1 Length=5192464 Score = 134 bits (148), Expect = 3e-26 Identities = 406/617 (66%), Gaps = 15/617 (2%) Strand=Plus/Plus Query 325052 TTGAACCCCTTGTACCACGGTTTCATTTCGACGAGGTCCTCTCCAGATATCAAACGCTTC 325111 ||||| || | |||| || | |||||| || || ||||| || || | |||||| Sbjct 3159646 TTGAAACCACGGAACCAAGGCTGCATTTCAACCAGCTCCTCGCCTCTCATGAGGCGCTTC 3159705 Query 325112 ACATTATCTACGATGTCTTTAGGGTTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCG 325171 || || || || | || |||||||||| |||| ||| || ||| ||||| || Sbjct 3159706 ACGTTTTCAACCACATCGACAGGGTTGTAATTGGGGATGGATGTGCTCCAGCCGGTGCCA 3159765 Query 325172 ATACCACTCGATCCATTCACCAGGATACTCGGAATAACAGGCACATAATACTCTGGTTCG 325231 ||||| || || || | ||||| | |||| || | | |||| |||||| Sbjct 3159766 ATACCGTCCGCACCGTTGATCAGGACCATTGGAACGGTGGGTAAGAAGAACTCAGGTTCG 3159825 Query 325232 ATCTTATCGCCGTCGTCGTACATATATTTCAGAAGATTGTCGTCCGTATCGACGAAAACC 325291 |||| || || || || || || || || || |||||||| | ||| || Sbjct 3159826 ATCTGATGACCATCTTCCACCAAGTAGTTGAGGAGGGCGTCGTCCGCGGGGTGGAAGACT 3159885 Query 325292 TGTCGAGTC-TGAGGGTTCAGT-TTCatatatatatatCGTGCACTCGCGTGATCCTTAC 325349 ||||||| || | | ||| || | | || || || | || || ||| || | Sbjct 3159886 GCTCGAGTCATGCGCGA--AGTGTTGGTGAAAATGTAACGAGGGCTGGCCGCATCTTTTC 3159943 Query 325350 CACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCA-GTTGATGTTATTGCTT 325408 |||| |||| | | ||||||||||| | |||| ||| | ||||| ||| ||||| Sbjct 3159944 CACCTTGCATGCGGGTGCCGAACTGGCCGTTCGGC-TCAAGGATGTTGACGTTGTTGCTG 3160002 Query 325409 CCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGA 325468 || ||| || ||| ||||| | | |||||| |||| | | ||||| ||||| Sbjct 3160003 CCCACAAAACTCTGCGCAAGACTGATGATGGTGGAGTGCAAACTTTGCTCGCCGTGGTGG 3160062 Query 325469 TAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAA 325528 || || | ||||| ||||| ||||| | ||||| ||||| | || | | | | Sbjct 3160063 TACTCGGTGTGCTCGGCAACATAACCAGACAGCTGTGAGACCTTGATCTCCTTGGAAAGA 3160122 Query 325529 TTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACC 325588 ||||||||||| | || | ||| || || ||| ||| |||||||||||| | ||| Sbjct 3160123 TTGCGCTTGAAGCAGGCGTACAGCACCTTGCGCTGACCAGGCTTGAAACCATCAGCAACC 3160182 Query 325589 GACGGAATGCTTCGTTCCAGATCGTACCGC----GAGAACAAAATAAGTTCCTTGTCGAT 325644 || |||||| || | || || |||| |||||||| || || ||||||| || Sbjct 3160183 GAGGGAATGGAACG---GATATTGT-CCGCCATGGAGAACAAGATGAGCTCCTTGTTGAC 3160238 Query 325645 GAAGTC-GGGAACGGGA 325660 |||||| | || ||||| Sbjct 3160239 GAAGTCAGAGATCGGGA 3160255 Score = 131 bits (144), Expect = 4e-25 Identities = 170/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || || || | ||| || || ||||| || ||||||| | Sbjct 4723796 CCACCGCGGAGACGAAGAACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 4723855 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || || ||| Sbjct 4723856 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTG---GTCGGGG 4723912 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || |||||||| || ||| || ||||| || || | || || || Sbjct 4723913 GGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATCGTGTCCGAAGACTC 4723971 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || || ||||||||||| |||||||| Sbjct 4723972 AACCTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 125 bits (138), Expect = 2e-23 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || || || || ||||||| Sbjct 4723568 CCACCACGCAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAA 4723627 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || ||| Sbjct 4723628 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 4723687 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || ||||| || || ||| |||||||| || || | |||||||| || || Sbjct 4723688 ATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATGGTGTCGCTCGACTCGAC 4723746 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || |||| ||||||||||| |||||||| Sbjct 4723747 CTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || || || ||||| || ||||| | Sbjct 4724024 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAA 4724083 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||| ||||| ||||| || | ||| Sbjct 4724084 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 4724143 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||| || || || Sbjct 4724144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACC 4724203 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| ||||||||||| || |||||||| Sbjct 4724204 TCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||||| || || || || | || || || || ||| Sbjct 4723376 TCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAG 4723435 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || ||||| || |||| || ||||| Sbjct 4723436 ATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG 4723495 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || || ||||| ||||| ||||||| ||||||||| Sbjct 4723496 TCAATGGTGTCGGACGACTCGACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACG 4723555 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 4723556 AAGATCTGCAT 4723566 Score = 96.9 bits (106), Expect = 8e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA 288357 ||||| | || ||||| ||||| || | || || || |||||||| |||||||| || Sbjct 3468017 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 3468076 Query 288358 GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 ||||| || || || |||||||| || | || ||||| || || | || Sbjct 3468077 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAG 3468136 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 3468137 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 >seq5 Length=2714734 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| ||||| || | || || || |||||| Sbjct 1972282 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1972341 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || ||||| || || || |||||||| || | || || || Sbjct 1972342 ATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1972401 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || ||||| ||||| ||||| || || || |||||||| Sbjct 1972402 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654248856780