Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-26 >seq1 Length=5192464 Score = 134 bits (148), Expect = 3e-26 Identities = 406/617 (66%), Gaps = 15/617 (2%) Strand=Plus/Plus Query 297173 TTGAATCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCAGCAATCAATCGCTTC 297232 ||||| || || |||| || | |||||| || || || || || || | |||||| Sbjct 3159646 TTGAAACCACGGAACCAAGGCTGCATTTCAACCAGCTCCTCGCCTCTCATGAGGCGCTTC 3159705 Query 297233 ACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCG 297292 ||||| || || | || || |||||| | ||||| || ||| ||||| || Sbjct 3159706 ACGTTTTCAACCACATCGACAGGGTTGTAATTGGGGATGGATGTGCTCCAGCCGGTGCCA 3159765 Query 297293 ATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCG 297352 || || || ||| || | ||| | | |||| || | | |||| |||||| Sbjct 3159766 ATACCGTCCGCACCGTTGATCAGGACCATTGGAACGGTGGGTAAGAAGAACTCAGGTTCG 3159825 Query 297353 ATCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAAACC 297412 |||| | ||| || || || || || || || ||||||| | ||| || Sbjct 3159826 ATCTGATGACCATCTTCCACCAAGTAGTTGAGGAGGGCGTCGTCCGCGGGGTGGAAGACT 3159885 Query 297413 TGTCGAGTC-TGAGGGTTCAGTTTTG-TGAAAATATATCGTGCACTCGCGTGATCCTTAC 297470 ||||||| || | | ||| ||| ||||||| || || | || || ||| || | Sbjct 3159886 GCTCGAGTCATGCGCGA--AGTGTTGGTGAAAATGTAACGAGGGCTGGCCGCATCTTTTC 3159943 Query 297471 CACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCA-GTTGATGTTATTGCTT 297529 |||| |||| | | ||||||||||| | |||| ||| | ||||| ||| ||||| Sbjct 3159944 CACCTTGCATGCGGGTGCCGAACTGGCCGTTCGGC-TCAAGGATGTTGACGTTGTTGCTG 3160002 Query 297530 CCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGA 297589 || ||| || ||| ||||| | | |||||| |||| | | ||||| ||||| Sbjct 3160003 CCCACAAAACTCTGCGCAAGACTGATGATGGTGGAGTGCAAACTTTGCTCGCCGTGGTGG 3160062 Query 297590 TAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAA 297649 || || | ||||| ||||| ||||| | ||||| ||||| | || | | | | Sbjct 3160063 TACTCGGTGTGCTCGGCAACATAACCAGACAGCTGTGAGACCTTGATCTCCTTGGAAAGA 3160122 Query 297650 TTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACC 297709 ||||||||||| | || | ||| || || ||| ||| |||||||||||| | ||| Sbjct 3160123 TTGCGCTTGAAGCAGGCGTACAGCACCTTGCGCTGACCAGGCTTGAAACCATCAGCAACC 3160182 Query 297710 GACGGAATGCTTCGTTCCAGATCGTACCGC----GAGAACAAAATAAGTTCCTTGTCGAT 297765 || |||||| || | || || |||| |||||||| || || ||||||| || Sbjct 3160183 GAGGGAATGGAACG---GATATTGT-CCGCCATGGAGAACAAGATGAGCTCCTTGTTGAC 3160238 Query 297766 GAAGTC-GGGAACGGGA 297781 |||||| | || ||||| Sbjct 3160239 GAAGTCAGAGATCGGGA 3160255 Score = 111 bits (122), Expect = 3e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| || ||||||||| | | |||||| | |||||||| || || || ||||||||| | Sbjct 4742816 GCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGCCT 4742875 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || |||| ||||| | || || | |||||||| | |||||||| | ||| ||||| Sbjct 4742876 GCTCGTCGCCCTTGGCAACGACAAGCTCTACAACTCGACCAACCCCTTCGACTTCATGGA 4742935 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 | | || ||||| || || || | ||||||||||| ||||||| Sbjct 4742936 GATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGTC 4742981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879858693500