Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq5 95.1 1e-14 >seq1 Length=5192464 Score = 147 bits (162), Expect = 2e-30 Identities = 298/439 (68%), Gaps = 5/439 (1%) Strand=Plus/Plus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 || || ||| |||| |||||||| |||||||||| |||||||||||||| ||||| Sbjct 4742547 GCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCC 4742606 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTA 47252 | || || | | || | || | |||||||| ||||| || ||||||||| Sbjct 4742607 TCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAACGAGCTC 4742666 Query 47253 ATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGT 47311 |||||| | ||||| || || |||||| |||||||||| ||| || || | || | Sbjct 4742667 ATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTCCTCTTCACCCACCTCCGC 4742726 Query 47312 CGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGA 47371 || | | || |||| | | | || | || ||||||||||| || Sbjct 4742727 CG--CCGCCCTC--ACCCCGACACCATTGCCAAGATCATCAAGGAGGCCGTCGCCATCGA 4742782 Query 47372 GATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGAT 47431 | |||||| || ||||||| || |||| || | | || |||||||| || | || Sbjct 4742783 GCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCAT 4742842 Query 47432 GAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGAT 47491 | | ||||||| || ||||| ||||||||||||||||| || | |||| | Sbjct 4742843 GTGCCAGTACATTGAGTTTGTTGCCGACCGCCTGCTCGTCGCCCTTGGCAACGACAAGCT 4742902 Query 47492 TTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAA 47551 ||| || | || || ||||| || ||| | | || |||||| |||||||| |||| Sbjct 4742903 CTACAACTCGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAA 4742962 Query 47552 CTTTTTCGAGAAGCGCGTC 47570 ||| |||||| ||| ||| Sbjct 4742963 CTTCTTCGAGTCGCGTGTC 4742981 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | || | ||| ||||| || || || ||||| ||| Sbjct 4723796 CCACCGCGGAGACGAAGAACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 4723855 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||| | |||||||| ||||| || Sbjct 4723856 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 4723915 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| ||||||| | ||| || Sbjct 4723916 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCGATCGTGTCCGAAGACTCAAC 4723974 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| ||||| || || || || || || |||||||| Sbjct 4723975 CTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | || || || || ||||| || || Sbjct 4724054 GTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCCAGCTGCTTGCCG 4724113 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||| || ||||| ||||||||||||||| ||| ||| |||| Sbjct 4724114 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 4724173 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| || | || | || |||||||| ||||| Sbjct 4724174 ACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTC 4724233 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 4724234 TTGACAAAGATCTGCAT 4724250 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| || | ||| ||||| || || || ||||| ||| || ||| || ||| || Sbjct 4723358 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCATCCTCC 4723417 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| | |||||||| ||||| || ||||||||||||||| Sbjct 4723418 AGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 4723477 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || ||| ||||| |||| || | |||||| | |||||| || | || | || || Sbjct 4723478 ATCTTCGACTTGACGTTG-TCAATGGTGTCGGACGACTCGACCTCAAGTGTGATGGTCTT 4723536 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || || || |||||||| Sbjct 4723537 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| |||| | |||||||| ||||| || |||||||||||| Sbjct 3468038 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 3468097 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| |||||||| |||||| |||| ||| | Sbjct 3468098 TCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGAT 3468156 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || || || || |||||||| Sbjct 3468157 GGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| |||||||| |||||||||||| Sbjct 4724374 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTG 4724433 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | |||||||| |||||| |||| ||| | Sbjct 4724434 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTGTCCGAGGACTCGACCTCGAGGGTAAT 4724492 Query 127078 CGTTTTGCCGGTCAG 127092 || |||||||| || Sbjct 4724493 GGTCTTGCCGGTGAG 4724507 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| | ||||| || || ||||| || || Sbjct 4723598 GTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 4723657 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || || |||||||||||| || || ||| Sbjct 4723658 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTC 4723717 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | |||||| |||| ||| | || || || |||| || Sbjct 4723718 ACGTTG-TCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAGTCTTACCCGTCAAGGT 4723776 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 4723777 CTTGACGAAGATCTGCAT 4723794 >seq5 Length=2714734 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 50662 GTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTTGCGGCCCAA 50721 |||||| || || |||||||||||||| |||| |||| |||||||||| ||| Sbjct 66243 GTTGCCGAGGTCACCGACGTGGCGGTCCGAGGCGGTGGGGCCGCCGTGGTTCTTGCCGTG 66302 Query 50722 CGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAATTCGTGCAC 50781 || || ||||| ||||||| |||||||||||||| |||| ||||| ||||| | Sbjct 66303 GGGGTTGAAGTGGCCGCCGGCGGACGTGCAGCCGTTCGAGTTGTCTCCGAACTCGTGGAT 66362 Query 50782 GTGGAACCCG 50791 |||||| ||| Sbjct 66363 GTGGAAGCCG 66372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 1972276 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1972335 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 1972336 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1972395 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||||| |||||| |||| ||| | || ||||| || || || Sbjct 1972396 ACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 1972455 Query 127097 TTTAC 127101 || || Sbjct 1972456 TTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500740562400