Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01]
10 sequences; 22,653,840 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq5 131 2e-25
>seq1
Length=5192464
Score = 147 bits (162), Expect = 2e-30
Identities = 150/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| ||||||||||||||||||||
Sbjct 4723831 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 4723890
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | || |||||||||| |||||| |||||| |||
Sbjct 4723891 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 4723949
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || || || || | ||||| || |||||||| || || || |
Sbjct 4723950 TGTCGATCGTGTCCGAAGACTCAACCTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGA 4724009
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 4724010 CGAAGATCTGCAT 4724022
Score = 143 bits (158), Expect = 3e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| || | ||| |||||| ||||| |||||||| || || || || |||| ||
Sbjct 4724042 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCC 4724101
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| |||| |||||||||||| | || | || |||||||||| |
Sbjct 4724102 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 4724161
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | |||||| || || || || | |||||||| |||
Sbjct 4724162 ATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 4724221
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || |||||||| |||||
Sbjct 4724222 CCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250
Score = 138 bits (152), Expect = 1e-27
Identities = 173/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | |||||| | | ||| | ||||| || | || |||||| ||||| |||||
Sbjct 4723333 TTACTGGCCTCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTA 4723392
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || || || | || || |||||||||||||| || || | ||||||||||||
Sbjct 4723393 GTCGGACAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTC 4723452
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538
|| || | || |||||||||| |||||| ||||| ||| | | | |||||| ||
Sbjct 4723453 GGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCGGACG 4723511
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || || | |||||||| ||||| |||| || || || ||||| |||||
Sbjct 4723512 ACTCGACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566
Score = 134 bits (148), Expect = 2e-26
Identities = 147/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||||||||| |||||||| |||| || |||||||||||||||||
Sbjct 4723603 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 4723662
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | | |||||||||| ||||| |||| | |||
Sbjct 4723663 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 4723721
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||||||| || || || | || || || || ||||||| || || |
Sbjct 4723722 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGA 4723781
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 4723782 CGAAGATCTGCAT 4723794
Score = 122 bits (134), Expect = 1e-22
Identities = 136/179 (76%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
||||||| || || ||||| |||| |||||||||||||||||||| || | |||||||
Sbjct 3468015 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 3468074
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534
|||||| || | || |||||||||| |||||| ||||| ||| | | | |||||
Sbjct 3468075 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCC 3468133
Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || | |||||||| |||||||| || || || || ||||| |||||
Sbjct 3468134 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192
Score = 93.3 bits (102), Expect = 5e-14
Identities = 117/158 (74%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
||||||| || || ||||| |||| |||||||||||||| ||||| || | |||||||
Sbjct 4724351 TGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 4724410
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534
|||||| || | || |||||||||| |||||| ||||| ||| | | | |||||
Sbjct 4724411 GGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCC 4724469
Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572
|| || || || | || ||||| ||||| || ||
Sbjct 4724470 GAGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTGAG 4724507
>seq5
Length=2714734
Score = 131 bits (144), Expect = 2e-25
Identities = 137/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| |||| ||||||||||||||||||||
Sbjct 1972281 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1972340
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||||| || | || |||||||||| |||||| ||||| |
Sbjct 1972341 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 1972400
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || || || || | |||||||| |||||||| || || || ||
Sbjct 1972401 GTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1972460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238329345200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |