Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq5 131 2e-25 >seq1 Length=5192464 Score = 147 bits (162), Expect = 2e-30 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 4723831 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 4723890 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| |||||| |||||| ||| Sbjct 4723891 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 4723949 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||| || |||||||| || || || | Sbjct 4723950 TGTCGATCGTGTCCGAAGACTCAACCTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGA 4724009 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 4724010 CGAAGATCTGCAT 4724022 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | ||| |||||| ||||| |||||||| || || || || |||| || Sbjct 4724042 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCC 4724101 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| |||| |||||||||||| | || | || |||||||||| | Sbjct 4724102 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 4724161 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| | | | |||||| || || || || | |||||||| ||| Sbjct 4724162 ATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 4724221 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 4724222 CCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 138 bits (152), Expect = 1e-27 Identities = 173/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | |||||| | | ||| | ||||| || | || |||||| ||||| ||||| Sbjct 4723333 TTACTGGCCTCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTA 4723392 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||| || || || | || || |||||||||||||| || || | |||||||||||| Sbjct 4723393 GTCGGACAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTC 4723452 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538 || || | || |||||||||| |||||| ||||| ||| | | | |||||| || Sbjct 4723453 GGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCGGACG 4723511 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | |||||||| ||||| |||| || || || ||||| ||||| Sbjct 4723512 ACTCGACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| |||||||| |||| || ||||||||||||||||| Sbjct 4723603 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 4723662 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | | |||||||||| ||||| |||| | ||| Sbjct 4723663 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 4723721 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||||||| || || || | || || || || ||||||| || || | Sbjct 4723722 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGA 4723781 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 4723782 CGAAGATCTGCAT 4723794 Score = 122 bits (134), Expect = 1e-22 Identities = 136/179 (76%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| |||||||||||||||||||| || | ||||||| Sbjct 3468015 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 3468074 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | || |||||||||| |||||| ||||| ||| | | | ||||| Sbjct 3468075 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCC 3468133 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || | |||||||| |||||||| || || || || ||||| ||||| Sbjct 3468134 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| |||||||||||||| ||||| || | ||||||| Sbjct 4724351 TGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 4724410 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | || |||||||||| |||||| ||||| ||| | | | ||||| Sbjct 4724411 GGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCC 4724469 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 || || || || | || ||||| ||||| || || Sbjct 4724470 GAGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTGAG 4724507 >seq5 Length=2714734 Score = 131 bits (144), Expect = 2e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 1972281 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1972340 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||||| || | || |||||||||| |||||| ||||| | Sbjct 1972341 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 1972400 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| |||||||| || || || || Sbjct 1972401 GTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238329345200