Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 233 2e-56 seq5 131 2e-25 seq2 116 4e-21 >seq1 Length=5192464 Score = 233 bits (258), Expect = 2e-56 Identities = 446/649 (69%), Gaps = 20/649 (3%) Strand=Plus/Minus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAG 132725 ||| || || |||||||||| | ||||||| ||||| | | ||| |||||||||| Sbjct 4742933 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGAGCTTGTCGTTGCCAAGGGCGACGAGCAG 4742874 Query 132726 CCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGAC 132784 | |||||| || ||||| ||||| || ||||| | || || | | | || | || Sbjct 4742873 GCGGTCGGCAACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATGAGCG 4742815 Query 132785 GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 || || || || |||||||| || |||||||||||||| || || ||| ||| | Sbjct 4742814 AGACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATGGCGACGGCCTCCTTGATGATCT 4742755 Query 132845 CCCTAACGCGCGCCGCGCTC-GGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAG 132903 || | | | || | | || || | | || |||| | | ||| |||||| Sbjct 4742754 TGGCAATG-GTGTCGGGGTGAGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCAGGCAAAG 4742696 Query 132904 TCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATG 132963 ||| || | |||||||| | || ||||| |||||| ||| || | ||||||||| Sbjct 4742695 TCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATG 4742636 Query 132964 AGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCG 133023 ||||| || || |||||||| || |||| ||| || |||||| ||||||| ||||||| Sbjct 4742635 AGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCG 4742576 Query 133024 ACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGC 133083 ||||| |||||||| | ||| ||||| |||||| | ||| | ||||||| | Sbjct 4742575 ACGGCAGCGAAAGCAATCAGACGCTCAGCGAACGACGAGCGCTTGTCCGTGATCCAGTGG 4742516 Query 133084 AGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGG 133143 || ||||| |||||||| | |||| ||| || || || || ||||| | || | Sbjct 4742515 AGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCAATGGCCTGGAA------G 4742462 Query 133144 AGTTTCTCTTCCGAGG-------AACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || | ||| | | || || | ||| ||||||||||| ||| || | || Sbjct 4742461 AGGTACTC-GCGGCGGGCGTTGTCGCGGATGTACGTGTCGATGAGAAGCGAGTAGGTCTC 4742403 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 ||||| | ||||||||| ||| || |||||||| ||| | ||||| | ||| Sbjct 4742402 GGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGGTCTTGGCCTCCATGCACTG 4742343 Query 133257 CACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTC 133304 || || |||| ||| |||||||| || || |||||||| |||||||| Sbjct 4742342 GACCTC-GGAGCAGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCGTC 4742295 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || ||||| |||| || ||| | | Sbjct 4724022 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACTCTCGAGGTTGAGTCTTCG 4723963 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| ||||| |||||| ||||||| Sbjct 4723962 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 4723904 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 4723903 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 4723844 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||||| || | || || ||| Sbjct 4723843 CATCCAGAAGGAGTCGACGCTCCACCTTGTTCTTCGT 4723807 Score = 122 bits (134), Expect = 9e-23 Identities = 136/179 (76%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||||||| |||| |||||| || | Sbjct 3468192 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 3468133 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| ||||||| Sbjct 3468132 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 3468074 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| ||||| | ||| ||||| ||||| || |||| |||||||| ||||||| Sbjct 3468073 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 3468015 Score = 116 bits (128), Expect = 4e-21 Identities = 151/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| || || || ||| |||| |||||| | | | Sbjct 4723794 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAGGTCGAGTCGAGC 4723735 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| ||||| || ||| |||||| Sbjct 4723734 GACACCATCGACAACG--TGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACC 4723677 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||| || |||||||| Sbjct 4723676 AGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACA 4723617 Query 38422 ACATCCAAAAGGAAGCGACGCTGCA 38446 |||| || ||||| |||| || || Sbjct 4723616 ACATTCAGAAGGAGTCGACTCTCCA 4723592 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| |||||||| | || |||||| | || Sbjct 4723566 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTCGAGTCGTCC 4723507 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | ||||| ||||| || ||| ||||||| Sbjct 4723506 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 4723448 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| |||||||| || | || || || ||||||||| Sbjct 4723447 GCAGCGCCTTATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACGCTGTCCGACTACAA 4723388 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||||||| || |||| || ||| | | || |||| Sbjct 4723387 CATCCAGAAGGAGTCGACGCTCCACCTGGTCCTCCGTCTTCGTGGAGGCC 4723338 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| | || |||||| || || Sbjct 4724250 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 4724191 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || || | ||||| Sbjct 4724190 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 4724131 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| ||||| |||||||| |||| || ||||| ||||||||| Sbjct 4724130 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAAC 4724071 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || |||| || ||| Sbjct 4724070 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCTCCGT 4724035 Score = 104 bits (114), Expect = 2e-17 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 107659 CCGACTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTG-G 107717 ||| ||||| |||||| ||||| |||||||| | | || |||||||||||||||||| | Sbjct 3966377 CCGTCTTGATGTTGCCGAGGTCACCGACGTGGCGGGCCTTGGCGTCGGGCGCGCCGTGCG 3966436 Query 107718 TCGCGCTTCGTCGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCG 107777 || | || |||||||| || || ||| ||| |||||||| | || ||| ||| Sbjct 3966437 TCTTG-TTGAAGGGGTTGAAGTGGCCGGCGGTCGAGTTGCAGCCGCCGGTCAGGTCACCG 3966495 Query 107778 AACTCGTGCACGTGGAAGCCGTGC 107801 |||| ||| | ||||||||||||| Sbjct 3966496 AACTGGTGGATGTGGAAGCCGTGC 3966519 >seq5 Length=2714734 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAA 38315 || || || ||||||||||| ||||||||| |||| |||||| || | |||| | | | Sbjct 1972460 GTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGAC 1972401 Query 38316 ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATT 38375 | | || || |||| ||||| ||||| || ||| ||||||| ||||| || || Sbjct 1972400 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATC 1972341 Query 38376 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAA 38435 | ||| ||||| ||||| || |||| |||||||| |||||||||||||| ||||| Sbjct 1972340 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAG 1972281 Query 38436 GCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || || |||| || ||| || | || || Sbjct 1972280 TCGACCCTCCACCTGGTCCTCCGTCTGCGTGGTGG 1972246 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/141 (76%), Gaps = 4/141 (3%) Strand=Plus/Plus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGT-CGC 107721 ||||| |||||| ||||| |||||||| | | | |||| ||| ||||||||| | Sbjct 66237 CTTGACGTTGCCGAGGTCACCGACGTGGCGGTCCGAGGCGGTGGGGCCGCCGTGGTTCTT 66296 Query 107722 GCTTCGTCGGG-TTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAAC 107780 || ||| ||| ||||| || ||||||| |||||||||||||| ||| |||||| Sbjct 66297 GC--CGTGGGGGTTGAAGTGGCCGCCGGCGGACGTGCAGCCGTTCGAGTTGTCTCCGAAC 66354 Query 107781 TCGTGCACGTGGAAGCCGTGC 107801 ||||| | |||||||||| || Sbjct 66355 TCGTGGATGTGGAAGCCGCGC 66375 >seq2 Length=3535900 Score = 116 bits (128), Expect = 4e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 132880 TGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCG 132939 |||| | ||| || ||| ||||||||| |||| ||||||||| | | || || ||| Sbjct 2110064 TGCTGGTACAGCAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATCAGCTCG 2110005 Query 132940 TTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAA 132999 || ||| || | || ||||||||||| || || |||||||| || |||||||||||| Sbjct 2110004 TTCGAGAACGTAAGCCCTGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGCGGCGAAA 2109945 Query 133000 CTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCG 133046 |||||| ||||||| ||| |||||| ||| || || | ||| || Sbjct 2109944 GAGCCCGAGAAGAAGATGCCTTCGACGCACGCAAAGGCGATCAGCCG 2109898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172737478400