Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 417 1e-111 seq1 86.0 8e-12 >seq2 Length=3535900 Score = 417 bits (462), Expect = 1e-111 Identities = 824/1212 (68%), Gaps = 14/1212 (1%) Strand=Plus/Plus Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| || ||||| || |||| || || || ||||| | ||||| | ||| Sbjct 3349251 GGGGTCATGATGCCACCAGCGGTCTCGATACCGAGCGAGAGAGGAGCAACGTCGAGGAGG 3349310 Query 6983 AACAGGTCTTGAACAGATTC---GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTC 7039 | ||||| || | || | || ||||| | | ||| | ||| ||||| | Sbjct 3349311 AGGAGGTCCTGGGTGGCCTCCGAGGTC---TCACCGTTGAGGATCGAGGCCTGGACGGCG 3349367 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACC-GTTAAA 7098 || ||||| ||||| ||||| |||||||| |||| || | || || | || Sbjct 3349368 GCACCGTAGGCGACGGCCTCGTCGGGGTTGATCGAGCGGTTGGGCTCACGGCCAGAGAAC 3349427 Query 7099 ATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGAT 7158 || ||||| | | | || || || ||||| || ||||| ||||| || | ||||| Sbjct 3349428 ATG-TCCGAGACGAGCTTCTGGATCTTGGGGATACGGGTCGAGCCACCAACAAGGACGAT 3349486 Query 7159 TTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || || || || | || |||||||| ||||| || || || || || || ||||| Sbjct 3349487 CTCGTTGACGTTGGCCTTGTCGATCTTGGAGTCGCGGAGGACCTTCTCAACGGGCTCCAT 3349546 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278 ||||| | |||| || || ||||| ||||| ||||| || || || || || Sbjct 3349547 GGTGGAGCGGAAGAGGTCCTGGCAGAGCTCCTCGAAACGGGCACGAGTGATCGAGGTGTA 3349606 Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAA 7338 ||| || | |||||| | | ||| || || || || | || || || | ||| || | Sbjct 3349607 GAAGTCGATACCGTCGAAGAGCGAGTCGATCTCGATCGAGGTCTGGGCAGCCGACGAGAG 3349666 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 || ||||| || |||||||| || || || | |||||| |||||||| | ||| || Sbjct 3349667 GGTGCGCTTGGCACGCTCACAGGCGGTGCGGAGACGACGGAGGGCACGAGCGTTGGAAGA 3349726 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 || || ||||| | || || || ||||| | |||||| | ||| | || Sbjct 3349727 AAGGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGGTTGACGAGACGGTTGTC 3349786 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| || |||||||| | ||| || || || || || || ||||| || ||||| || | Sbjct 3349787 GAAGTCCTCACCACCAAGGTGGGTGTCACCGGCAGTGGCCTTGACCTCGAAGATGCCCTC 3349846 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || ||| | | | ||| ||||| || ||||||||||| ||||| || ||||| ||||| Sbjct 3349847 CTCGATGGTGAGGAGCGAGACATCGAAGGTACCACCACCAAGGTCGAAGATGAGAACGTT 3349906 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 | | ||| | || | ||||| |||||||| || || || || || || || || || || Sbjct 3349907 CTTCTCGCCCTCGGTCTTCTTGTCGAGACCATAGGCAATGGCGGCGGCGGTGGGCTCGTT 3349966 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || ||||| || | ||||| ||||| || | || || || || || || || || Sbjct 3349967 GATGATACGGAGGACCTCGAGGCCGGCAATGGTACCGGCGTCCTTGGTGGCCTGACGCTG 3350026 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||| ||||| |||||||| ||||| || ||||| || | | ||| | || || || Sbjct 3350027 CGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCCTTGGAGACGGTGCCGCCAAGGTA 3350086 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 | || ||| | || ||||| ||| | || ||||| || || ||||| || | || || Sbjct 3350087 GGCCTCGGCGGTCTCCTTCATCTTGATGAGGACCATGGACGAGATCTCCTCGGGCGAGAA 3350146 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGAT 7878 ||| ||| |||||| | || || | || | ||| || ||| || || ||| Sbjct 3350147 CTGCTTCTCCTCACCGCGGTACTCGACCTGGATGAAGGGCTT-GCCG--GCCTTGGAGAT 3350203 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 ||||| | | ||| | ||||| ||| ||||| | ||| ||||| | || Sbjct 3350204 GACCTTGAAGGGCCAGTGCTTCATGTCGGACTGGACGTCGGCGTCGTCGAACTTGCGGCC 3350263 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 |||||||||||| || || || || ||||| | |||||||||||| |||||||| || Sbjct 3350264 GATAAGACGCTTGGCGTCGAAGACGGTGTTGTAGGGGTTCATGGCGACCTGGTTCTTGGC 3350323 Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG 8058 ||||| ||||| ||||| || || || || ||||| || || ||||| || || Sbjct 3350324 AGCGTCACCGATGAGACGCTC---CGAGTCGGTGAAGGCGACATAGGAGGGGGTGGTGCG 3350380 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGA 8118 || || |||||||| || || || || || |||||||| ||||||||| |||| || || Sbjct 3350381 GTTACCCTGGTCGTTGGCGATGATCTCGACACGGTCGTTCTGCCAGACGGCGACACAGGA 3350440 Query 8119 ATACGTTGTTCC 8130 || || || || Sbjct 3350441 GTAGGTGGTACC 3350452 >seq1 Length=5192464 Score = 86.0 bits (94), Expect = 8e-12 Identities = 189/281 (67%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC- 7515 || || || |||||||| | ||| || || || ||||| ||||| || |||| ||| Sbjct 3211982 TCAAAGTCCTCACCACCAAGGTGGGTGTCACCGTTGGTCGACTTGACCTCGAAGACACCC 3211923 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | | | | ||| | ||| || |||||||| || ||||| | | | | Sbjct 3211922 TTCTGCA-TCTCGAGGATCGAGATATCGAAGGTACCACCTCCAAGGTCGTAGACGGCAAT 3211864 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | ||||| |||| ||||| ||||| |||| || || || || || || Sbjct 3211863 GACAGCCGAGTCGT------TCTTGTCGAGGCCGTAGGCGAGGGCGGCGGCGGTGGGCTC 3211810 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | ||| || || ||||||||||| | || || || || || || || Sbjct 3211809 GTTGATGACACGGAGGACGTCAAGGCCAGCAATCTGACCGGCGTCCTTGGTAGCCTGACG 3211750 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 ||||| ||||| |||||||| ||||| || ||||| |||| Sbjct 3211749 CTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGT 3211709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132720608400