Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6 201 1e-46 seq1 123 3e-23 seq2 105 8e-18 seq3 89.7 6e-13 >seq6 Length=2565775 Score = 201 bits (222), Expect = 1e-46 Identities = 680/1050 (65%), Gaps = 33/1050 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || || |||||||||| || || | ||||| || Sbjct 1607483 CCCCCAGCACATGCTCATGCGTGTGGCCGTCGGTATCCACGGCGACAACATTGAGAAGGT 1607424 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || ||||| | | || |||| |||||| | || ||||||| Sbjct 1607423 CCTCGAGACCTACAACCTCATGTCGGAGCGCTAC-TTCACCCACGCGTCTCCTACCCTCT 1607365 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||| | ||||| || |||| ||||| || ||||| | || | ||||| | Sbjct 1607364 TCAACTCGGGTACCCCCCACGCCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAAGGACG 1607305 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || || | ||||| |||| ||| |||| || ||||| ||||| ||| || | Sbjct 1607304 ACTCGATTGACGGCATCTACGACACCCTCAAGACCTGCGCCCAGATCTCCAAGACTGCCG 1607245 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907 |||||||||| | |||||||| | | | ||||| | |||||| || || || Sbjct 1607244 GTGGTATCGGTCTCCACATCCACAACATTCGTGCCAAG--GGCTCGTACATTGCCGGCAC 1607187 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || | || | || || | || ||||| |||| | ||||||| || || || Sbjct 1607186 CAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGCGCGTACGACGCCACTGCTCGTTA 1607127 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||| | ||| ||||| | || | | || |||| |||||||| || Sbjct 1607126 CGTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTTGAGCCCTG 1607070 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| ||| | | || ||||| || || | ||||| || | ||||||| || Sbjct 1607069 GCACGCCGATGTGTTCGACTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCG 1607010 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| || ||||||| ||| |||||||| || || |||||||||||| | || ||| | Sbjct 1607009 CGCCCGTGACCTCTTCTACGCCCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCA 1606950 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| | ||| | ||| | || || | | || ||||| || |||| | | Sbjct 1606949 GGACGGCGAGTGGACCCTCATGTGCCCTGCCGAGTGCCCCGGCCTTGCCGACGTCCACTC 1606890 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAG---AAAGTCGGGCGACTGC 112255 ||| |||| || | || ||| ||||||||| || | | |||| ||| Sbjct 1606889 GGAGAAGTTCGAGGAGCTGTACGAGAAGTACGAGCGTGAGGGCAAGGGTCGCAAGACCAT 1606830 Query 112256 GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 | || |||| || | ||| ||||| || || |||| |||||||||||| Sbjct 1606829 CAAGG-CCCAGAAGC-----TCTGGTTCGCTATCCTTGAGGCTCAGACCGAGACTGGTGG 1606776 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||||| ||||| ||||| |||| ||| || || || | | || Sbjct 1606775 CCCGTTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCAC 1606716 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 |||||| ||||||||||| || || ||| | || | | | | |||||| || Sbjct 1606715 CATCAAGTCCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGC 1606656 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 ||| || |||||||| || |||||||||| | || || ||||| || | | Sbjct 1606655 TGTCTGCAACCTCGCGTCTCTCGCTCTCCCTGCCTTCGTCGACTTCGAGACCAACTCGTA 1606596 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 || | | || |||||| | | || || || || || ||||| || || || Sbjct 1606595 CGACTTCAAGAAGCTCCACCAGATCACCAAGGTCGTTACCAAGAACCTCGACCAGGTCAT 1606536 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 || || | |||||||| |||| ||||| || || || ||| | ||||| || Sbjct 1606535 CACCAGGAACTACTACCCCGTTCCTGAG---GCTCGCAACTCGAACATGCGCCACCGCCC 1606479 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGA 112642 | ||||| |||||||| ||||| || || Sbjct 1606478 CGTCGGTCTTGGTGTCCAGGGTCTTGCCGA 1606449 >seq1 Length=5192464 Score = 123 bits (136), Expect = 3e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 || || |||||||| || | || || || || ||||| ||||||||||| || || Sbjct 4742541 TCGTTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCG 4742600 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || | | || | |||||||||||||| || |||||||| |||||| |||||||||| Sbjct 4742601 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAAC 4742660 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| ||||||||||| |||||| || ||||| Sbjct 4742661 GAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGC 4742701 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/238 (70%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 16113 |||||| | || || || || || ||||||| ||| || || || ||| | || Sbjct 2044670 CTTTCCGATAGCGTCGATTTCGTCGATGAAGATGATACAGGGAGCGTTCTTCTTGGCCGT 2044611 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | |||| || || || |||||| || || ||||| ||||||||||| || || | | Sbjct 2044610 CG-CAAACAGGTCGCGGACACGCGAGGGACCGACACCGACAAACATCTCGACGAACTCGG 2044552 Query 16174 CGGCGGA-ACATTGGAT--GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 16230 | || || ||| ||| || || || | || || ||| |||| |||||| | Sbjct 2044551 AACCCGAGAC---GGACAGGAACGGCACCTTGGCCTCTCCGGCAGTGGCCTTGGCGAGGA 2044495 Query 16231 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 | |||||||| ||||| || ||||| ||||| |||||| || |||||||||||||| Sbjct 2044494 GGGTCTTACCGGTACCAGGAGGACCCGAGAGGATGGCACCACGGGGAATCTTGGCGCC 2044437 >seq2 Length=3535900 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 102190 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGC 102249 |||| |||||||| || || || ||||||||||| || || ||| ||| || | |||| Sbjct 2109905 TCGCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATCTTCTGGC 2109964 Query 102250 TCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACG 102309 |||||||||| || ||||||||||| || ||||| |||||||| ||| || |||| Sbjct 2109965 TCAAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGCCGCGACG 2110024 Query 102310 AGGGACTCCACCAAGAGTTTGCG 102332 |||| | ||| || |||||| Sbjct 2110025 AGGGCATGCACACCGACTTTGCG 2110047 >seq3 Length=3082120 Score = 89.7 bits (98), Expect = 6e-13 Identities = 199/297 (67%), Gaps = 4/297 (1%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 ||||| | ||| || ||||| | |||| ||| || | ||| || | | ||||| Sbjct 361479 GCATCCAGCTCGTCGATGAAAATGATGGCCGGTGCCTTGTTGCGGGCAGCCTTGAAGAGC 361538 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 16184 || || ||||||||||| || ||||| ||| ||| ||| ||||| | | | | || Sbjct 361539 TCACGCACACGCTTGGCACCAACACCGACATACAGCTCGTCAAAGCTGGAGCCAGAGGCA 361598 Query 16185 TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 16244 | ||| |||||| | || || |||| || |||||||| || ||||| || ||| Sbjct 361599 AACAGGAAAGGGACACCGGCCTCGCCAGCAACAGCGCGGGCGAGCAGGGTCTTGCCGGTA 361658 Query 16245 CCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTCCAAAGTATC 16302 || || || | ||||||| |||| || || | |||| |||| ||| || | Sbjct 361659 CCAGGAGGGCCAGTGAGGAGGACACCGCGGGGGAGCTTGCCGCCGAGCTT--GGAGAACT 361716 Query 16303 TCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAA 16359 |||| || | ||| || || || |||||||| || | || | ||||| | |||| Sbjct 361717 TCTCGGGGTTCTTGAGGAACTCGACAATCTCCTCGAGCTCGCCCTTGGCCTCCTCAA 361773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742322407200