Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6 203 4e-47 seq1 163 3e-35 seq3 107 2e-18 >seq6 Length=2565775 Score = 203 bits (224), Expect = 4e-47 Identities = 638/981 (65%), Gaps = 17/981 (2%) Strand=Plus/Plus Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163 || || |||||||| ||||| ||||| | |||||| || |||||| ||| ||||| Sbjct 1606449 TCGGCAAGACCCTGGACACCAAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGAGCC 1606508 Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223 |||||||| |||| | | ||||||| | | ||| ||||| || || ||| Sbjct 1606509 TCAGGAACGGGGTAGTAGTTCCTGGTGATGACCTGGTCGAGGTTCTTGGTAACGACCTTG 1606568 Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGG 110283 ||||| | ||||| || | | | ||| ||| || ||||| | ||| | ||| Sbjct 1606569 GTGATCTGGTGGAGCTTCTTGAAGTCGTACGAGTTGGTCTCGAAGTCGACGAAGGCAGGG 1606628 Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATT 110343 ||||| | |||||| || ||||| |||| ||| || | | | ||| || | || Sbjct 1606629 AGAGCGAGAGACGCGAGGTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATC 1606688 Query 110344 TCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTG 110403 || || || | |||||| ||| ||| || | || || ||| ||||| ||| |||| Sbjct 1606689 TCAGTGCAGAGGTTGGAGGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGGTTG 1606748 Query 110404 CATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCC 110463 || ||||| ||||||||| | ||| |||||| || ||||| | || || || || Sbjct 1606749 GCAGCGTCCTTGTAGAGCATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATAGCG 1606808 Query 110464 TTCCATACATCGGCGGCGGGGACA-GTTGCGTTAGCGAGACCTT--CCTC---CTCGTAC 110517 ||| | || | ||| | | || | |||| |||| |||| ||||||| Sbjct 1606809 AACCAGA-----GCTTCTGGGCCTTGATGGTCTTGCGAC-CCTTGCCCTCACGCTCGTAC 1606862 Query 110518 TTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCG 110577 || ||||| ||||| || | || || || || | ||| || || | | Sbjct 1606863 TTCTCGTACAGCTCCTCGAACTTCTCCGAGTGGACGTCGGCAAGGCCGGGGCACTCGGCA 1606922 Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 || || | ||||| ||| | || ||| ||| || | ||||||||| ||||| || ||| Sbjct 1606923 GGGCACATGAGGGTCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 1606982 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 || | || |||| ||||||||| ||| |||| || | || ||||| | || Sbjct 1606983 CAGAGGGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 1607042 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 || | ||||| | | ||| | |||||| || || || |||| || | || || | Sbjct 1607043 TCGAGGAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGA 1607102 Query 110758 CGACGA---CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || || |||||| || || || || ||||| | | | | | |||||| || Sbjct 1607103 CGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGCATGGGG 1607162 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 | || || | || | || || || || ||| || ||||||||||||| | Sbjct 1607163 ACGATGCCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCTTGGCACGAATGTTG 1607222 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGT 110933 ||||| || | ||| |||||||| || ||| || || || || ||| |||| || Sbjct 1607223 TGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCT-TGAGGGT 1607281 Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993 | || || || |||||||| || |||| |||| | || ||||| || |||||||| Sbjct 1607282 GTCGTAGATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACGACATCTG 1607341 Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGA 111053 | | || || |||| |||||||| ||||| | ||| || |||| | | || Sbjct 1607342 GGCGTGGGGGGTACCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGCGCTCCGA 1607401 Query 111054 CATCTTGTTGTATGTGTCGAG 111074 ||| |||||| || ||||| Sbjct 1607402 CATGAGGTTGTAGGTCTCGAG 1607422 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 109422 ACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGT 109481 ||| || ||||||||| |||||| |||| | ||||| || | ||| | || | | Sbjct 1605773 ACCAGTCTTGAGACCACGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGAGAAGGA 1605832 Query 109482 CGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGC 109541 || | | | | ||| | |||||| ||||| |||||||| |||||| || || Sbjct 1605833 GGGGTTGGCGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGC 1605892 Query 109542 CGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGAT 109601 || | |||||||| | ||| || ||| ||||||||||||||||| | ||||| Sbjct 1605893 AGCGAGGTCGATGACAGCCTTCTGCGAAATCTCCCAGACAGTCTTGTAGATGGCCTTGAG 1605952 Query 109602 ATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC 109640 ||||| ||||||| ||||| || || || ||||| Sbjct 1605953 GTCATCAGGAATGTTGGGGATGTGCTGGATGGAACCACC 1605991 >seq1 Length=5192464 Score = 163 bits (180), Expect = 3e-35 Identities = 350/513 (68%), Gaps = 15/513 (3%) Strand=Plus/Minus Query 11496 AATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTT 11555 ||| | ||| ||||||||||| || || | || ||| || || | ||| |||||| Sbjct 2044850 AATGTGACGGTCGAAACGACCAGGACGCATGAGCGCAGGGTCGAGCACGTCGGGACGGTT 2044791 Query 11556 TGTAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAG 11615 ||| |||| | ||| |||||| || || ||||||||||||| || |||||| Sbjct 2044790 GGTACCGGCGAGGACGACAATGTGCTCCTTGGTGCCGAAACCGTCCATCTCAACGAGAAG 2044731 Query 11616 CTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCA---TACCACC--TGCCGAACGC 11670 |||||| | ||| ||||||||| |||||| | | | || || | || ||| Sbjct 2044730 CTGGTTCAAGGTCGATTCACGCTCGTCGTTGCCGCCAAAGTTGCCGCCCTTTCC--ACGA 2044673 Query 11671 TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 ||| |||| |||||| || || |||||||| | |||||| || ||| | || | Sbjct 2044672 GCCTTTCCGATAGCGTCGATTTCGTCGATGAAGATGATACAGGGAGCGTT-CTTCTTGGC 2044614 Query 11731 TGT-TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTT 11789 || | || || || || |||||| | || ||||| || |||||||| ||||| | Sbjct 2044613 CGTCGCAAACAGGTCGCGGACACGCGAGGGACCGACACCGACAAACATCTCGACGAACTC 2044554 Query 11790 TGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848 | | | | || || | ||| || || || | ||| || || |||| ||||||| Sbjct 2044553 GGAACCCG-AGACGGACAGGAACGGCACCTTGGCCTCTCCGGCAGTGGCCTTGGCGAGGA 2044495 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-- 11906 | |||||||| |||||||| | ||| | ||| | ||| |||||||| |||||||| || Sbjct 2044494 GGGTCTTACCGGTACCAGGAGGACCCGAGAGGATGGCACCACGGGGAATCTTGGCGCCGA 2044435 Query 11907 ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTT 11966 |||| ||| | |||| ||||||||| | |||| |||| || |||||||| Sbjct 2044434 GCTTC--TCGTATTTTGCGGGCTCCTTGAGGAACTTGACAAACTCCATAATCTCCTCCTT 2044377 Query 11967 GGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999 | | ||| ||||| | || ||| |||||| Sbjct 2044376 GCCCTCGTCCATACCGGCGACGTCGCGGAAACG 2044344 Score = 111 bits (122), Expect = 2e-19 Identities = 173/244 (71%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || || || || ||||||||||| || |||| || || Sbjct 4742702 GGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 4742643 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| ||||||| ||| || || |||||||| Sbjct 4742642 GGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGAT 4742583 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 |||||| || |||||||| | ||||||||||| || | |||| |||||| || Sbjct 4742582 GCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGC-GAACGACGAGCGCTTGTCCGTGA 4742524 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| | ||| ||||||| |||||| || |||||||||| || | ||||| | || Sbjct 4742523 TCCAGTGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCAATGGCCTGGA 4742464 Query 119731 AAAG 119734 | || Sbjct 4742463 AGAG 4742460 >seq3 Length=3082120 Score = 107 bits (118), Expect = 2e-18 Identities = 202/292 (69%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742 || || | ||| |||||||| | ||| |||| ||| || || | ||| || Sbjct 361479 GCATCCAGCTCGTCGATGAAAATGATGGCCGGTGCCTTGTTGCGGGCAGCCTTGAAGAGC 361538 Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA---A 11799 ||||| |||||||| || |||||||| || ||| ||| | ||| | | | |||| | Sbjct 361539 TCACGCACACGCTTGGCACCAACACCGACATACAGCTCGTCAAAGCTGGAGCCAGAGGCA 361598 Query 11800 CACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCC 11859 || | | |||||| || | ||| ||||| | || || ||||| || ||||| || Sbjct 361599 AACAGGA--AAGGGA-CACCGGCCTCGCCAGCAACAGCGCGGGCGAGCAGGGTCTTGCCG 361655 Query 11860 GTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CTTCCAAAGT 11917 |||||||| | |||| ||| ||| | || ||||||| |||| | || ||| | | Sbjct 361656 GTACCAGGAGGGCCAGTGAGGAGGACACCGCGGGGGAGCTTGCCGCCGAGCTTGGAGA-- 361713 Query 11918 AGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | ||| || ||||||||||| || ||||||||||| || || ||||||| Sbjct 361714 ACTTCTCGGGGTTCTTGAGGAACTCGACAATCTCCTCGAGCTCGCCCTTGGC 361765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975926378000