Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6 168 8e-37 seq1 93.3 5e-14 >seq6 Length=2565775 Score = 168 bits (186), Expect = 8e-37 Identities = 672/1048 (64%), Gaps = 31/1048 (3%) Strand=Plus/Plus Query 106280 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 106339 || || ||||| || ||||| | ||| | || | ||| ||||| || || || || || Sbjct 1606449 TCGGCAAGACCCTGGACACCAAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGAGC- 1606507 Query 106340 GTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396 |||| ||||| || | || ||| ||||| ||| || || |||||||| | | Sbjct 1606508 --CTCAGGAACGGGGTAGTAGTTCCTGGTGATGACCTGGTCGAGGTTCTTGGTAACGACC 1606565 Query 106397 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 106456 || ||||| | || || || | | || | | | ||||| | ||| | Sbjct 1606566 TTGGTGATCTGGTGGAGCTTCTTGAAGTCGTACGAGTTGGTCTCGAAGTCGACGAAGGCA 1606625 Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || || |||| || || | ||||| ||||| |||||| | | |||||| | Sbjct 1606626 GGGAGAGCGAGAGACGCGAGGTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATG 1606685 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| ||| || || || | | || ||||| ||| | Sbjct 1606686 ATCTCAGTGCAGAGGTTGGAGGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGG 1606745 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||| || ||||||||||||||| | || || ||||| ||||| | || || || Sbjct 1606746 TTGGCAGCGTCCTTGTAGAGCATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATA 1606805 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTA 106692 || ||| | | || | | || | |||| ||| ||| | ||||| |||||| Sbjct 1606806 GCGAACCAGAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTGCCCTCACGCTCGTA 1606861 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG--CGTCGGAGAGACCTGGTGCCTTG 106750 ||| ||| || | || |||| ||| | | | |||||| || || || || | Sbjct 1606862 CTTCTCGTACAGCTCCTCGAACTTCTC--CGAGTGGACGTCGGCAAGGCCGGGGCACTCG 1606919 Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810 | || || | || | ||| | || ||| ||| || ||||||||||| ||||| || Sbjct 1606920 GCAGGGCACATGAGGGTCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGG 1606979 Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 ||||| |||| | ||||| || | ||| |||| || | || ||||| | Sbjct 1606980 ATCCAGAGGGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTC 1607039 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930 | || ||||| || | | ||| |||||||| |||||||| |||| || | | || Sbjct 1607040 AGGTCGAGGAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCG 1607099 Query 106931 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 ||||| ||| | || | || || || || ||||||| | |||| ||| Sbjct 1607100 G---GACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGC 1607156 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTC 107042 || || | || || | || | || || || || ||| ||||| | |||| | Sbjct 1607157 ATGGGGACGATGCCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCT--TGGCAC 1607214 Query 107043 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 107102 | | |||||||| | || ||||| || || ||| ||||| || || || | Sbjct 1607215 GAATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCT 1607274 Query 107103 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 107162 | || || | ||||| |||| || ||||| ||||| |||||| |||||||| | Sbjct 1607275 TGAGGGTGTCGTAGATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACG 1607334 Query 107163 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC 107222 ||||||| | || ||||| | ||||||||||| || | ||||| |||| | Sbjct 1607335 ACATCTGGGCGTGGGGGGTACCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGC 1607394 Query 107223 CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 107282 | ||||| || ||| ||||| | ||| ||||||| || |||||||| |||| Sbjct 1607395 GCTCCGACATGAGGTTGTAGGTCTCGAGGACCTTCTCAATGTTGTCGCCGTGGATACCGA 1607454 Query 107283 TGGCCACACGCATAAACATGTATTGGGG 107310 |||||||||||| | ||||| ||||| Sbjct 1607455 CGGCCACACGCATGAGCATGTGCTGGGG 1607482 >seq1 Length=5192464 Score = 93.3 bits (102), Expect = 5e-14 Identities = 260/391 (66%), Gaps = 10/391 (3%) Strand=Plus/Minus Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155 ||| || || || | ||| |||||||||||| | |||| || | |||||| ||||| Sbjct 4742879 GAGCAGGCGGTCGGCAACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 4742820 Query 117156 GAGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCAC 117215 ||| ||||| || || || |||| | | ||| || | || ||||| || | Sbjct 4742819 GAGCGAGACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATGGCGACGGCCTCCTTGAT 4742760 Query 117216 GATGGCGTGG--ATAGTTTCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTCCAC 117272 ||| | ||| || || |||| ||| || | || | ||||||| Sbjct 4742759 GAT--CTTGGCAATGGTGTCGGG-GTGAGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCA 4742703 Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||||||||| || || || || || || || |||||| || || Sbjct 4742702 GGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 4742643 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | | || || || ||||||||||| Sbjct 4742642 GGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGAT 4742583 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT--GTCA 117450 ||||| || || || |||| || ||||| ||||| || |||| |||| || Sbjct 4742582 GCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGCGAACGA-CGAGCGCTTGTCCGT-G 4742525 Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTTCT 117481 | ||| | | ||||| | |||||||||| Sbjct 4742524 ATCCAGTGGAGGGCCCAGTCGGCCTTCTTCT 4742494 Score = 86.0 bits (94), Expect = 7e-12 Identities = 165/238 (69%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 9420 |||||| | || || || || || ||||||| ||||| || || ||| || || Sbjct 2044670 CTTTCCGATAGCGTCGATTTCGTCGATGAAGATGATACAGGGAGCGTTCTTCTTGGCCG- 2044612 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 | |||| || ||||| || | || || ||||| ||||||||||| || || | | Sbjct 2044611 TCGCAAACAGGTCGCGGACACGCGAGGGACCGACACCGACAAACATCTCGACGAACTCGG 2044552 Query 9481 CGGCGGA-ACATTGGAT--GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | || || ||| ||| || || || | || || ||| |||| |||||| | Sbjct 2044551 AACCCGAGAC---GGACAGGAACGGCACCTTGGCCTCTCCGGCAGTGGCCTTGGCGAGGA 2044495 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 | |||||||| ||||| || ||||| ||||| |||||| || |||||||||||||| Sbjct 2044494 GGGTCTTACCGGTACCAGGAGGACCCGAGAGGATGGCACCACGGGGAATCTTGGCGCC 2044437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980726252400