Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 324 3e-83 seq1 233 4e-56 seq2 114 2e-20 >seq6 Length=2565775 Score = 324 bits (358), Expect = 3e-83 Identities = 822/1240 (66%), Gaps = 39/1240 (3%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 ||||||||||||||||||||||| || ||| | ||||||| ||| | | | || | Sbjct 1606359 AGGGCAGCGTGGTAGATGGTCTCGAAAATCTTGATGTTGAG-CTCACGAGCACCGGCCGA 1606417 Query 221480 GT-GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 || |||||| | ||| || | ||| |||||| || ||||| || || | ||||| Sbjct 1606418 GTCGAAGGGGAGACGGAGGGCCATGAAGGTGTCGGCAAGACCCTGGACACCAAGACCGAC 1606477 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 ||| | ||| | | |||| || | || || || ||||| || |||| | ||| Sbjct 1606478 GGGGCGGTGGCGCATGTTCGAGTTGCGAGCCTCAGGAACGGGGTAGTAGTTCCTGGTGAT 1606537 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658 | | || ||||||| || | ||| || | || | ||||||| |||| Sbjct 1606538 GACCTGGTCGAGGTTCTTGGTAACGACCTTGGTGATCTGGTGGAGCTTCT------TGAA 1606591 Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718 | || | | ||| | || || || || || || || | || || Sbjct 1606592 GTCGTACGAGTTG--GTCTCGAAG----TCGACGAAGGCAGGGAGAGCGAGAGACGCGAG 1606645 Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778 ||| || || || ||||| || | | |||| |||||||| || ||||||||| Sbjct 1606646 GTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGA 1606705 Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838 | |||||||||| || ||||| | || || |||||||| |||||||||||||||||||| Sbjct 1606706 GGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAGAG 1606765 Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898 ||| || || || |||||||| ||||||| | || || | |||||| | ||||| Sbjct 1606766 CATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATAGCGAACCAGAGCT-TCTGGG 1606824 Query 221899 GCTC-ACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 || | ||| | |||| | ||| |||| ||| || ||| ||| Sbjct 1606825 CCTTGATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTCTCGTAC---------AGCT 1606875 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011 || ||||| || || | ||| | ||||| || ||| ||| || ||||| || Sbjct 1606876 CCTCGAACTTCTCCGAGTGGACGTCGGCAAGGCCGGGGCACTCGGCAGGGCACATGAGGG 1606935 Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071 |||| | || | | ||| | || |||||||||||| |||||||| || || | | Sbjct 1606936 TCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGA 1606995 Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131 |||| || | || || ||||||| ||||| ||| |||||||| || | || || | Sbjct 1606996 AGAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGGTCGAGGAAGTCGA 1607055 Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191 | | || |||||||| ||||| || |||| ||| | || ||||| ||||||||||||| Sbjct 1607056 ACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCAC 1607115 Query 222192 CCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251 |||| || || | | |||| | | ||| || | || || | ||||| | Sbjct 1607116 CCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGCATGGGGACGATGCCGTTCG 1607175 Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG- 222310 | ||||||||||| |||||||| || ||| | | ||| ||| | | Sbjct 1607176 AGTAGCCGTTGGTGCCGGCAATGTACGAGCCCTTGGCACGAATGTTG-TGGATGTGGAGA 1607234 Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 |||||||||||||| || |||||| ||||||| ||||||| ||||| |||||| Sbjct 1607235 CCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTGTCGTAGATGCCG 1607294 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430 || || ||||| ||||| | | | || || || ||||||||||| | | || || | Sbjct 1607295 TCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACGACATCTGGGCGTGGGGGGTA 1607354 Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTAC 222490 | | ||| || || || ||| ||||| || ||||||| | ||||| || | ||| Sbjct 1607355 CCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTAG 1607414 Query 222491 GTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATG 222550 ||||| | ||| | | |||||||| ||||| || | ||| | |||| |||| Sbjct 1607415 GTCTCGAGGACCTTCTCAATGTTGTCGCCGTGGATACCGACGGCCACACGCATGAGCATG 1607474 Query 222551 TACTGGGGCCTCTCCACAGGACCCTTGGAGCTG---GAGAGCAGGTACGATTTTTCCAGA 222607 | |||||| | ||| | || ||||| | || ||| |||||||| || || Sbjct 1607475 TGCTGGGGGCGCTCGGC--GA-CCTTGCCGTTGATCTTGAGGAGGTACGAACGCTCAAGG 1607531 Query 222608 GTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGT 222647 |||||||| |||||||||||| | ||||||| | | ||| Sbjct 1607532 GTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCACGGTCGT 1607571 >seq1 Length=5192464 Score = 233 bits (258), Expect = 4e-56 Identities = 466/690 (68%), Gaps = 17/690 (2%) Strand=Plus/Plus Query 25618 TCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTG 25677 || || || || || |||||||| || |||| | ||| | || || |||| | || Sbjct 4742292 TCGGACGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCTGCTCCGAGGTCCAGTGCATG 4742351 Query 25678 GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTAT 25737 ||||||||| |||||||| |||||||| || || || | ||||| ||| || Sbjct 4742352 GAGGCCAAGACCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTAC 4742411 Query 25738 GCCAAGCTTCTGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGT 25794 | |||||| || |||||||| ||| |||| | || || || Sbjct 4742412 TC---GCTTCTCATCGACACGTACATCCGCGACAACGCCCGCCGCGAGTACCTCTTCCAG 4742468 Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 ||||| || ||| ||| ||||||||| |||||| |||||| | | ||||||| | Sbjct 4742469 GCCATTGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCACTGGATCA-C 4742527 Query 25855 AGCCAGAGCGCTA--CGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCT 25912 | || |||||| |||| | ||||| ||| | || || ||||| || |||||||||| Sbjct 4742528 GGACA-AGCGCTCGTCGTTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCT 4742586 Query 25913 TTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGC 25972 | ||| || |||||||| ||||||||||||||||| || || ||||||||| | Sbjct 4742587 TCTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTC 4742646 Query 25973 TGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCC 26032 | ||| ||||||||||||||| | |||||||||||||||| || |||||||||| Sbjct 4742647 TCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCC 4742706 Query 26033 TGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCA 26092 | |||| ||| |||| | | || | ||| | || ||| | || ||||||| Sbjct 4742707 TCCTCTTCAC---CCACCTCCGCCGCCGCCCTCACCCCGACACCATTGCCAAGATCATCA 4742763 Query 26093 AAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGG 26152 | ||||| || | |||||| ||||||| | | | Sbjct 4742764 AGGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATCG 4742823 Query 26153 GCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GT-G 26210 |||||||| || |||||| |||| |||||||||| ||| ||||||| ||||| || | Sbjct 4742824 GCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGCCTGCTCGTCG 4742883 Query 26211 CCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACAT 26270 || || || || || ||||||| || | ||||| |||||||| ||||| | || Sbjct 4742884 CC--CTTGGCAACGACAAGCTCTACAACTCGACCAACCCCTTCGACTTCATGGAGATGAT 4742941 Query 26271 ATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 ||| | | || ||| |||||||||| || Sbjct 4742942 CTCGCTCCAGGGCAAGGCCAACTTCTTCGA 4742971 >seq2 Length=3535900 Score = 114 bits (126), Expect = 2e-20 Identities = 127/164 (77%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 25879 CGGCTGGTAGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937 |||||| | |||||||| ||| || || |||||||| ||| || || || || ||||| Sbjct 2109898 CGGCTGATCGCCTTTGCGTGC-GTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCAT 2109956 Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCA 25996 ||||||||||||| || || |||||| ||||| ||| || || |||||||| |||| Sbjct 2109957 CTTCTGGCTCAAGAAGCGTGGCCTCATGCCAGGGCT-TACGTTCTCGAACGAGCTGATCA 2110015 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 || | |||||||| | |||| || ||||| |||||||| ||| Sbjct 2110016 GCCGCGACGAGGGCATGCACACCGACTTTGCGTGCCTGCTGTAC 2110059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844683894400