Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 seq5 104 2e-17 >seq6 Length=2565775 Score = 114 bits (126), Expect = 1e-20 Identities = 604/957 (63%), Gaps = 17/957 (2%) Strand=Plus/Plus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519 |||| |||||| || |||||||| || ||| |||| | | ||||| | ||| || Sbjct 1606632 GCGAGAGACGCGAGGTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCA 1606691 Query 147520 GCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCAC 147579 | ||| |||||| | | || ||| || | | ||||| || || || ||| Sbjct 1606692 GTGCAGAGGTTGGAGGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGGTTGGCA 1606751 Query 147580 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AAC 147636 ||||| ||| |||||||| |||| || || |||||| || | |||| |||| ||| Sbjct 1606752 GCGTCCTTGTAGAGCATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATAGCGAAC 1606811 Query 147637 CTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCG 147696 | || | ||| || | || ||| |||||| |||||| |||| Sbjct 1606812 CAGAGC---TTCTGGGCCTTGATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTCTCG 1606868 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 |||| | ||| |||| || || | |||||||||||||| |||| || ||| Sbjct 1606869 TACAGCTCCTCGAACTTCTCCGAGTGGACGTCGGCAAGGCCGGGGCACTCGGCAGGGCAC 1606928 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 || || | |||| | ||||| | || || ||| || || || || | ||| || Sbjct 1606929 ATGAGGGTCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGAGG 1606988 Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTT-TCAAATTA 147873 ||||| | || || || || || | |||| | || || | | | ||| | Sbjct 1606989 GCGTAGAAGAGGTCACGGGC---GCGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGGTCG 1607045 Query 147874 AGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC 147933 || | | | | |||||||||||||| |||| ||||| ||| | ||||| |||| Sbjct 1607046 AGGAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGACGC 1607105 Query 147934 TTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCC 147990 || || ||||||||||| | || | || || || |||| | |||||| | Sbjct 1607106 TTGTTGCCACCCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGCATGGGGACG 1607165 Query 147991 AGGCCGCTCGCAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTG 148049 | |||| ||| ||| |||||||||| || | ||| ||| || | | ||| Sbjct 1607166 ATGCCGTTCG-AGTAGCCGTTGGTGCCGGCAATGTACGAGCCCTTGGCACGAATGTTGTG 1607224 Query 148050 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGT 148109 | || | || || || ||| | ||| || || ||||| | || Sbjct 1607225 GATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTGTC 1607284 Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 |||||||||||| || ||||| || | | | | | || ||||| |||| || | Sbjct 1607285 GTAGATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACGACATCTGGGC 1607344 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | || |||| ||| ||||| ||| |||||| || || | | ||| Sbjct 1607345 GTGGGGGGTACCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGCGCTCCGACAT 1607404 Query 148230 CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289 | | || ||||| | | | || |||| ||||||||| || || | || || || Sbjct 1607405 GAGGTTGTAGGTCTCGAGGACCTTCTCAATGTTGTCGCCGTGGATACCGACGGCCACACG 1607464 Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATT 148349 ||||||||||||||| || || ||||| || | |||||||||||| || || | Sbjct 1607465 CATGAGCATGTGCTGGGGGCGCTCGGCGACCTTGCCGTTGATCTTGAGGAGGTACGAACG 1607524 Query 148350 TTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 || ||||| ||| | |||||||| ||||| |||| || | ||||| |||||| Sbjct 1607525 CTCAAGGGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCACGGTCGTAGATGATGGC 1607581 >seq5 Length=2714734 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 51731 AGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGTC 51790 || || ||| ||||| | ||| ||||||||||| || ||| | || ||||||||| Sbjct 66234 AGTCTTGACGTTGCCGAGGTCACCGACGTGGCGGTCCGAGGCGGTGGGGCCGCCGTGGTT 66293 Query 51791 GCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 51850 ||||| |||||||||||| |||| || |||||||||||||| | |||| ||||| Sbjct 66294 CTTGCCGTGGGGGTTGAAGTGGCCGCCGGCGGACGTGCAGCCGTTCGAGTTGTCTCCGAA 66353 Query 51851 TTCGTGCACGTGGAATCCGTGC 51872 ||||| | |||||| ||| || Sbjct 66354 CTCGTGGATGTGGAAGCCGCGC 66375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611140423600