Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq4 181 1e-40 >seq4 Length=3026064 Score = 181 bits (200), Expect = 1e-40 Identities = 382/572 (67%), Gaps = 61/572 (11%) Strand=Plus/Plus Query 146988 GCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGAC 147047 ||| ||||| || | ||||| |||||||||| |||||| || |||||||| || || Sbjct 1700233 GCCCGTCACAAACGCAATCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAACGGCAC 1700292 Query 147048 CCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT----------CCC 147097 || ||||| | ||| | ||| | |||||||| |||||||||||| ||| Sbjct 1700293 GCCGAGGCCGAGGTCGCACGAGCGCTGGTACATGAGGCACGAGAGCTTGGGCCGGGCCCC 1700352 Query 147098 ---CGTC---GGCCACGTAA-----AACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 |||| ||| ||||| |||||||| | ||||||||||| ||||| ||||| Sbjct 1700353 GGGCGTCTCAGGCAGCGTAACGAAGAACTGGCAGAACATGTGGCACGGGGGCAGGGCCAT 1700412 Query 147147 G----------------------GCGG---GCAGGT-----------CCGCGGGGTTCCA 147170 | |||| ||| | |||| |||||||| Sbjct 1700413 GAGCTTGAGGTCTGGGGGTGAGCGCGGTCCGCATGCAACACACCTACCCGCCGGGTTCCA 1700472 Query 147171 GGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 || | ||| | ||||| | | ||||| || |||| |||| || || ||| Sbjct 1700473 CGCGCTCAGCACGATCCGCCGGTCGGTCGGG-TTGTTCTTGATCTTATCAATGACCTCGG 1700531 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCA 147288 |||||||| ||||||| |||| |||||| |||| ||||| ||||| || ||| Sbjct 1700532 CGAGCTGGTCGACGCCCTTGCCCGCGTAGTC-GTCCTCGCAGGTGCCGTACGCCGCGCCA 1700590 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAG 147348 ||||| | |||||||||||| ||||| ||||| |||||||| | |||||||| | Sbjct 1700591 AAGTGGCGCCACTGGAAGCCATACACCGGCCCGAGGTCGCCCTCGCGGCGGTGCGAGAGG 1700650 Query 147349 CCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408 || | || | || |||||| | ||||||| || |||||||| ||| ||||| ||| Sbjct 1700651 CCAACGCGGTCCAGGAACTCGCGCGACCCGTTCCCGGCCCAGATGTGCACGCCCTTCGCG 1700710 Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468 | |||| | || ||||||| |||| | |||||| ||||||||||| | || || Sbjct 1700711 GCGAGCACGTTGCCGTCCGTGCAGCCGGCCACGAACCACAGCAGCTCCTCGATCACGCCG 1700770 Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | | || || | ||| || ||||||||||| Sbjct 1700771 CGCGTGAACACGCGCTTCGTCGTCAGCAGGGG 1700802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487927064000